RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 CENPKQ9BS16 269 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 PIMREGQ9BSJ6 248 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 ZNF747Q9BV97 191 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 C1QTNF6Q9BXI9 259 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 TSPY26PQ9H489 355 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 ALG9Q9H6U8 611 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 CXorf36Q9H7Y0 433 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 POPDC3Q9HBV1 291 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 OPTCQ9UBM4 332 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 IGHV3-15A0A0B4J1V0 119 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 OR5H1A6NKK0 313 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 CXorf49A8MYA2 514 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 NDUFS8O00217 210 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 FOXE1O00358 373 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 SEMA3DO95025 777 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 ZNF17P17021 662 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 COX5AP20674 150 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 ENPP1P22413 925 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 IVDP26440 423 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 OR3A2P47893 321 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 CDH15P55291 814 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 FOXG1P55316 489 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 CARD18P57730 90 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 HILS1P60008 231 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 PLAURQ03405 335 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 GALNT1Q10472 559 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 CSTF3Q12996 717 aaKnown RBP7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 FASTKD3Q14CZ7 662 aaKnown RBP7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 TRIP10Q15642 601 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 TIMM23BQ5SRD1 257 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 CCNYL2Q5T2Q4 361 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 ZNF544Q6NX49 715 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 COMMD6Q7Z4G1 85 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 ISCA2Q86U28 154 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 LSRQ86X29 649 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 ZNF433Q8N7K0 673 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 LINC01356Q8N9X3 169 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 OR52N5Q8NH56 324 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 MAGOHBQ96A72 148 aaKnown RBP7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 BAG1Q99933 345 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 RHOJQ9H4E5 214 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 PTGES2Q9H7Z7 377 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 FAM120CQ9NX05 1096 aaKnown RBP7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 POU2F3Q9UKI9 436 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 ABCG2Q9UNQ0 655 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 SLC25A15Q9Y619 301 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 TEX264Q9Y6I9 313 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 ARFGEF3Q5TH69 2177 aa7.43□□□□□ -1.22
HMGB1P39-201ENST00000366304 NPIPA5A0A0B4J1W7 369 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 LOC390937A0A1W2PQ73 354 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 A0A1W2PRB8 838 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 C1orf226A1L170 272 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 GOLGA6L10A6NI86 522 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 SUPT3HB4E1H0 165 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 NPIPA7E9PJI5 369 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 TP73O15350 636 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 SUPT3HO75486 399 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 ANGPTL1O95841 491 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 YES1P07947 543 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 TACSTD2P09758 323 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 DHRS4L1P0CG22 281 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 NPIPA8P0DM63 369 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 GGT1P19440 569 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 NTF4P34130 210 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 SFTPDP35247 375 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 KRT20P35900 424 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 MAPK12P53778 367 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 MANFP55145 182 aaKnown RBP7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 ATP6V0D1P61421 351 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 RAC1P63000 192 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 SLC25A3Q00325 362 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 CHRNEQ04844 493 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 MGAT5Q09328 741 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 FRG1Q14331 258 aaKnown RBP7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 MORF4L2Q15014 288 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 ZKSCAN8Q15776 578 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 PLPPR5Q32ZL2 321 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 GRAMD1BQ3KR37 738 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 TMEM201Q5SNT2 666 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 SH2D4BQ5SQS7 431 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 LIPJQ5W064 366 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 CCDC137Q6PK04 289 aaKnown RBP7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 ESPNLQ6ZVH7 1005 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 LILRA2Q8N149 483 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 METTL4Q8N3J2 472 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 LRRC17Q8N6Y2 441 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 L3MBTL4Q8NA19 623 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 KCTD4Q8WVF5 259 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 MAIP1Q8WWC4 291 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 MTBPQ96DY7 904 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 FBXO17Q96EF6 278 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 DTNBP1Q96EV8 351 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 RADILQ96JH8 1075 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 KLHL15Q96M94 604 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 NSUN5Q96P11 429 aaKnown RBP7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 ZNF300Q96RE9 604 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 SNX18Q96RF0 628 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 INPP5KQ9BT40 448 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 TRIM5Q9C035 493 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 COQ10BQ9H8M1 238 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms