RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 AENQ8WTP8 325 aaKnown RBP2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 FAHD2AQ96GK7 314 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 TMEM80Q96HE8 168 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 PPP1R16AQ96I34 528 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 C7orf34Q96L11 122 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 AMDHD1Q96NU7 426 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 RIT2Q99578 217 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 SLC6A7Q99884 636 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 AIPL1Q9NZN9 384 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 NPIPA1Q9UND3 350 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 SAMD4AQ9UPU9 718 aaKnown RBP2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 L3MBTL1Q9Y468 752 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 FRMPD4Q14CM0 1322 aa2.9□□□□□ -1.95
RNU6-28P-201ENST00000362378 A0A1B0GU03 582 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 SAGE2PA6NJ88 616 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 OR6C65A6NJZ3 312 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 CCT8L1PA6NM43 557 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 EFCAB7A8K855 629 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 OR7A17O14581 309 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 ARPC3O15145 178 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 MSH4O15457 936 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 GPRIN2O60269 458 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 SNNO75324 88 aaPredicted RBP2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 HPP00738 406 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 CGAP01215 116 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 CAPN1P07384 714 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 CD55P08174 381 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 H2BFMP0C1H6 154 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 ZNF44P15621 663 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 CAPN2P17655 700 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 AP3M2P53677 418 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 PAX2Q02962 417 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 KCNJ11Q14654 390 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 LAGE3Q14657 143 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 SLC10A1Q14973 349 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 PDK3Q15120 406 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 SLC5A12Q1EHB4 618 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 TIGITQ495A1 244 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 APTXQ7Z2E3 356 aaKnown RBP2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 KIAA1328Q86T90 577 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 LCA5Q86VQ0 697 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 C9orf40Q8IXQ3 194 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 ZNF679Q8IYX0 411 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 LINC01561Q8N1V8 128 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 CSNK1A1LQ8N752 337 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 VN1R17PQ8TDU5 208 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 SLC41A3Q96GZ6 507 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 SH3YL1Q96HL8 342 aaPredicted RBP2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 C12orf66Q96MD2 445 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 PSKH2Q96QS6 385 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 CITED1Q99966 193 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 PUS3Q9BZE2 481 aaKnown RBP2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 PNNQ9H307 717 aaKnown RBP2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 LRRC40Q9H9A6 602 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 APMAPQ9HDC9 416 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 COX16Q9P0S2 106 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 PIPOXQ9P0Z9 390 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 WRAP73Q9P2S5 460 aaPredicted RBP2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 ZNF221Q9UK13 617 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 RPH3ALQ9UNE2 315 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 OARD1Q9Y530 152 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 USP16Q9Y5T5 823 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 IKBKGQ9Y6K9 419 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 SLCO1B1Q9Y6L6 691 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 COL5A2P05997 1499 aaPredicted RBP2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 CACNA1FO60840 1977 aa2.89□□□□□ -1.95
RNU6-28P-201ENST00000362378 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 A8MX80 341 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 MPHOSPH10O00566 681 aaKnown RBP2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 PRRG1O14668 218 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 PHF1O43189 567 aaPredicted RBP2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 TPST2O60704 377 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 RHBDL1O75783 438 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 GATA1P15976 413 aaPredicted RBP2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 HPCAL1P37235 193 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 VLDLRP98155 873 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 MAP2K1Q02750 393 aaPredicted RBP2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 RAB40BQ12829 278 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 RIPK1Q13546 671 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 RUNX3Q13761 415 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 LPAL2Q16609 132 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 NDUFA9Q16795 377 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 HIGD2BQ4VC39 106 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 ATF7IP2Q5U623 682 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 TMEM225Q6GV28 225 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 ACOT1Q86TX2 421 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 GTSCR1Q86UQ5 136 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 Q8N9G6 341 aaPredicted RBP2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 EIF1ADQ8N9N8 165 aaKnown RBP2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 OR10A7Q8NGE5 316 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 OR2L2Q8NH16 312 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 AGAP11Q8TF27 550 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 SHC3Q92529 594 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 PIGCQ92535 297 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 COQ2Q96H96 371 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 TGM7Q96PF1 710 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 RANBP9Q96S59 729 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 MYCBPQ99417 103 aaPredicted RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms