RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 TIMP2P16035 220 aa21.76■■□□□ 1.07
NPAS3-201ENST00000346562 IL32P24001 234 aa21.76■■□□□ 1.07
NPAS3-201ENST00000346562 ASRGL1Q7L266 308 aa21.76■■□□□ 1.07
NPAS3-201ENST00000346562 C17orf50Q8WW18 174 aa21.76■■□□□ 1.07
NPAS3-201ENST00000346562 FOXRED1Q96CU9 486 aaPredicted RBP21.76■■□□□ 1.07
NPAS3-201ENST00000346562 VASPP50552 380 aaPredicted RBP21.75■■□□□ 1.07
NPAS3-201ENST00000346562 CEACAM7Q14002 265 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 C17orf99Q6UX52 265 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 SLC39A11Q8N1S5 342 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 CLSTN3Q9BQT9 956 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 TIMM29Q9BSF4 260 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 CNIH4Q9P003 139 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 WNT4P56705 351 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 CLDN2P57739 230 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 WDR5P61964 334 aaKnown RBP21.75■■□□□ 1.07
NPAS3-201ENST00000346562 GPR139Q6DWJ6 353 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 HTR3DQ70Z44 454 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 OR5D14Q8NGL3 314 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 ADAMTS19Q8TE59 1207 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 CDS1Q92903 461 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 ZMYND19Q96E35 227 aaPredicted RBP21.75■■□□□ 1.07
NPAS3-201ENST00000346562 HIPK2Q9H2X6 1198 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 IL26Q9NPH9 171 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 ZFAND5O76080 213 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 RETP07949 1114 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 C15orf39Q6ZRI6 1047 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 CNOT9Q92600 299 aaKnown RBP21.75■■□□□ 1.07
NPAS3-201ENST00000346562 IGKV6D-21A0A0A0MT36 114 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 H3BQ06 376 aaPredicted RBP21.75■■□□□ 1.07
NPAS3-201ENST00000346562 ZNF423Q2M1K9 1284 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 OR4K15Q8NH41 348 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 OR14A2Q96R54 314 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 OR51B6Q9H340 312 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 PRMT8Q9NR22 394 aaPredicted RBP21.75■■□□□ 1.07
NPAS3-201ENST00000346562 C17orf113A0A1B0GUU1 675 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 NAP1L6A6NFF2 107 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 MYF6P23409 242 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 DCAF7P61962 342 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 OPN5Q6U736 354 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 ZNF765Q7L2R6 523 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 HSD11B1LQ7Z5J1 315 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 FAM83FQ8NEG4 500 aaPredicted RBP21.75■■□□□ 1.07
NPAS3-201ENST00000346562 OR7G3Q8NG95 312 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 OR5D16Q8NGK9 328 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 MON2Q7Z3U7 1717 aa21.75■■□□□ 1.07
NPAS3-201ENST00000346562 ANTXRLA6NF34 631 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 FAM198BQ6UWH4 519 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 ACOT4Q8N9L9 421 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 OR51Q1Q8NH59 317 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 MSANTD3Q96H12 275 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 ZNF337Q9Y3M9 751 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 SETD1AO15047 1707 aaKnown RBP21.74■■□□□ 1.07
NPAS3-201ENST00000346562 PEAK1Q9H792 1746 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 A0A1B0GV50 99 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 HTR6P50406 440 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 TMEM244Q5VVB8 128 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 CPOQ8IVL8 374 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 OBP2BQ9NPH6 170 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 MOGSQ13724 837 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 DCUN1D4Q92564 292 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 ZNF696Q9H7X3 374 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 MYEF2Q9P2K5 600 aaKnown RBP21.74■■□□□ 1.07
NPAS3-201ENST00000346562 MRPS14O60783 128 aaKnown RBP21.74■■□□□ 1.07
NPAS3-201ENST00000346562 SCGB2A2Q13296 93 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 SDR9C7Q8NEX9 313 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 BIRC8Q96P09 236 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 SH3BGRL2Q9UJC5 107 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 RHBDD3Q9Y3P4 386 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 C12orf71A8MTZ7 269 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 GABRR1P24046 479 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 IL4RP24394 825 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 CD38P28907 300 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 ZNF136P52737 540 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 NKPD1Q17RQ9 610 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 CPZQ66K79 652 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 KIAA1211LQ6NV74 962 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 GTPBP8Q8N3Z3 284 aaPredicted RBP21.74■■□□□ 1.07
NPAS3-201ENST00000346562 BCL7BQ9BQE9 202 aa21.74■■□□□ 1.07
NPAS3-201ENST00000346562 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.73■■□□□ 1.07
NPAS3-201ENST00000346562 ATP1B3P54709 279 aa21.73■■□□□ 1.07
NPAS3-201ENST00000346562 WBP2NLQ6ICG8 309 aa21.73■■□□□ 1.07
NPAS3-201ENST00000346562 TPRA1Q86W33 373 aa21.73■■□□□ 1.07
NPAS3-201ENST00000346562 GDPD1Q8N9F7 314 aa21.73■■□□□ 1.07
NPAS3-201ENST00000346562 MUCL1Q96DR8 90 aa21.73■■□□□ 1.07
NPAS3-201ENST00000346562 HCFC1R1Q9NWW0 138 aa21.73■■□□□ 1.07
NPAS3-201ENST00000346562 ICAM2P13598 275 aa21.73■■□□□ 1.07
NPAS3-201ENST00000346562 CSNK1DP48730 415 aa21.73■■□□□ 1.07
NPAS3-201ENST00000346562 RPL23AP62750 156 aaKnown RBP21.73■■□□□ 1.07
NPAS3-201ENST00000346562 ESCO2Q56NI9 601 aa21.73■■□□□ 1.07
NPAS3-201ENST00000346562 FAM180BQ6P0A1 224 aa21.73■■□□□ 1.07
NPAS3-201ENST00000346562 KCTD20Q7Z5Y7 419 aa21.73■■□□□ 1.07
NPAS3-201ENST00000346562 PRRC1Q96M27 445 aa21.73■■□□□ 1.07
NPAS3-201ENST00000346562 OR6C2Q9NZP2 312 aa21.73■■□□□ 1.07
NPAS3-201ENST00000346562 CPNE7Q9UBL6 633 aa21.73■■□□□ 1.07
NPAS3-201ENST00000346562 TSPAN15O95858 294 aa21.73■■□□□ 1.07
NPAS3-201ENST00000346562 OR51L1Q8NGJ5 315 aa21.73■■□□□ 1.07
NPAS3-201ENST00000346562 RTP4Q96DX8 246 aa21.73■■□□□ 1.07
NPAS3-201ENST00000346562 LRIT1Q9P2V4 623 aa21.73■■□□□ 1.07
NPAS3-201ENST00000346562 FAM155AB1AL88 458 aaPredicted RBP21.73■■□□□ 1.07
NPAS3-201ENST00000346562 F5H5P2 479 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms