RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 OR1Q1Q15612 314 aa19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 KLHL26Q53HC5 615 aa19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 RBM48Q5RL73 367 aaKnown RBP19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 C1orf94Q6P1W5 598 aa19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 FAM199XQ6PEV8 388 aaPredicted RBP19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 ZNF730Q6ZMV8 503 aa19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 ZNF517Q6ZMY9 492 aaPredicted RBP19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 RRM2BQ7LG56 351 aa19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 SLC34A3Q8N130 599 aa19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 FBLIM1Q8WUP2 373 aa19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 ACOT11Q8WXI4 607 aaPredicted RBP19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 HDAC2Q92769 488 aaKnown RBP19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 TP53INP1Q96A56 240 aa19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 VMP1Q96GC9 406 aa19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 TAAR9Q96RI9 348 aa19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 TMEM27Q9HBJ8 222 aa19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 SLC7A7Q9UM01 511 aa19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 SLC35A3Q9Y2D2 325 aa19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 KIF26BQ2KJY2 2108 aa19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 REM1O75628 298 aa19.77■□□□□ 0.76
TSPAN3-202ENST00000346495 UTS2O95399 124 aa19.77■□□□□ 0.76
TSPAN3-202ENST00000346495 THY1P04216 161 aa19.77■□□□□ 0.76
TSPAN3-202ENST00000346495 OSMP13725 252 aa19.77■□□□□ 0.76
TSPAN3-202ENST00000346495 HPGDP15428 266 aa19.77■□□□□ 0.76
TSPAN3-202ENST00000346495 IL12BP29460 328 aa19.77■□□□□ 0.76
TSPAN3-202ENST00000346495 GGT2P36268 569 aa19.77■□□□□ 0.76
TSPAN3-202ENST00000346495 GTF2A1P52655 376 aaPredicted RBP19.77■□□□□ 0.76
TSPAN3-202ENST00000346495 RNF4P78317 190 aa19.77■□□□□ 0.76
TSPAN3-202ENST00000346495 TOP3AQ13472 1001 aaPredicted RBP19.77■□□□□ 0.76
TSPAN3-202ENST00000346495 APOFQ13790 326 aa19.77■□□□□ 0.76
TSPAN3-202ENST00000346495 ZNF613Q6PF04 617 aa19.77■□□□□ 0.76
TSPAN3-202ENST00000346495 CD300LDQ6UXZ3 194 aa19.77■□□□□ 0.76
TSPAN3-202ENST00000346495 HSDL2Q6YN16 418 aa19.77■□□□□ 0.76
TSPAN3-202ENST00000346495 SLCO6A1Q86UG4 719 aa19.77■□□□□ 0.76
TSPAN3-202ENST00000346495 GALNT6Q8NCL4 622 aa19.77■□□□□ 0.76
TSPAN3-202ENST00000346495 APCDD1LQ8NCL9 501 aa19.77■□□□□ 0.76
TSPAN3-202ENST00000346495 GNPDA2Q8TDQ7 276 aa19.77■□□□□ 0.76
TSPAN3-202ENST00000346495 WDR77Q9BQA1 342 aaPredicted RBP19.77■□□□□ 0.76
TSPAN3-202ENST00000346495 DDA1Q9BW61 102 aa19.77■□□□□ 0.76
TSPAN3-202ENST00000346495 NRSN2Q9GZP1 204 aa19.77■□□□□ 0.76
TSPAN3-202ENST00000346495 WDFY4Q6ZS81 3184 aa19.77■□□□□ 0.76
TSPAN3-202ENST00000346495 TRIM64A6NGJ6 449 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 A6NHS1 94 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 SCDO00767 359 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 ABCB7O75027 752 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 CLPTM1O96005 669 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 MT-CO3P00414 261 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 CSTAP01040 98 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 CD63P08962 238 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 JMJD7P0C870 316 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 MMP11P24347 488 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 ADH7P40394 386 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 CRISP1P54107 249 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 PLCXD2Q0VAA5 305 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 NCF4Q15080 339 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 MEP1AQ16819 746 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 CTU2Q2VPK5 515 aaKnown RBP19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 C6orf141Q5SZD1 244 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 ZER1Q7Z7L7 766 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 NKAIN4Q8IVV8 208 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 ZNF440Q8IYI8 595 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 PIGXQ8TBF5 258 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 DEPDC7Q96QD5 511 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 TRIM2Q9C040 744 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 REV1Q9UBZ9 1251 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 ZNF223Q9UK11 482 aaPredicted RBP19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 PCDHGA6Q9Y5G7 932 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 TSPAN2O60636 221 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 STK17BO94768 372 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 GSTM3P21266 225 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 TBXA2RP21731 343 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 ACAA2P42765 397 aaKnown RBP19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 CDK5R2Q13319 367 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 PIP4P1Q86T03 277 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 APLFQ8IW19 511 aaPredicted RBP19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 PRR22Q8IZ63 422 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 OMA1Q96E52 524 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 ADOQ96SZ5 270 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 KRCC1Q9NPI7 259 aaPredicted RBP19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 TOR4AQ9NXH8 423 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 PISDQ9UG56 409 aa19.76■□□□□ 0.75
TSPAN3-202ENST00000346495 LOC102723996A0A087X1L8 192 aa19.75■□□□□ 0.75
TSPAN3-202ENST00000346495 CCDC187A0A096LP49 1063 aa19.75■□□□□ 0.75
TSPAN3-202ENST00000346495 CDC14CA4D256 554 aa19.75■□□□□ 0.75
TSPAN3-202ENST00000346495 DPPA5A6NC42 116 aa19.75■□□□□ 0.75
TSPAN3-202ENST00000346495 SMNDC1O75940 238 aaKnown RBP eCLIP19.75■□□□□ 0.75
TSPAN3-202ENST00000346495 CHMP24386 653 aa19.75■□□□□ 0.75
TSPAN3-202ENST00000346495 PNLIPRP2P54317 469 aa19.75■□□□□ 0.75
TSPAN3-202ENST00000346495 SLC26A5P58743 744 aa19.75■□□□□ 0.75
TSPAN3-202ENST00000346495 ALDH6A1Q02252 535 aaKnown RBP19.75■□□□□ 0.75
TSPAN3-202ENST00000346495 EIF3IQ13347 325 aaKnown RBP19.75■□□□□ 0.75
TSPAN3-202ENST00000346495 Q6ZPB1 254 aaPredicted RBP19.75■□□□□ 0.75
TSPAN3-202ENST00000346495 MBOAT2Q6ZWT7 520 aa19.75■□□□□ 0.75
TSPAN3-202ENST00000346495 OR8K3Q8NH51 312 aa19.75■□□□□ 0.75
TSPAN3-202ENST00000346495 NUBPLQ8TB37 319 aa19.75■□□□□ 0.75
TSPAN3-202ENST00000346495 MESP1Q9BRJ9 268 aa19.75■□□□□ 0.75
TSPAN3-202ENST00000346495 ADNPQ9H2P0 1102 aa19.75■□□□□ 0.75
TSPAN3-202ENST00000346495 TUBA8Q9NY65 449 aaPredicted RBP19.75■□□□□ 0.75
TSPAN3-202ENST00000346495 FLRT3Q9NZU0 649 aa19.75■□□□□ 0.75
TSPAN3-202ENST00000346495 PTRH2Q9Y3E5 179 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms