RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 ACAD8Q9UKU7 415 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 ZNF98A6NK75 572 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 KCNJ13O60928 360 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 SLCO2B1O94956 709 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 GYPBP06028 91 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 RPL3P39023 403 aaKnown RBP13.88□□□□□ -0.19
CLCN1-201ENST00000343257 B2MP61769 119 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 APOOLQ6UXV4 268 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 TRMT11Q7Z4G4 463 aaKnown RBP13.88□□□□□ -0.19
CLCN1-201ENST00000343257 ACBD7Q8N6N7 88 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 FBXO22Q8NEZ5 403 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 GNPDA2Q8TDQ7 276 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 MACROD1Q9BQ69 325 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 SEMA4CQ9C0C4 833 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 SIRT3Q9NTG7 399 aaPredicted RBP13.88□□□□□ -0.19
CLCN1-201ENST00000343257 LIPT1Q9Y234 373 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 OR6C74A6NCV1 312 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 PLPP1O14494 284 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 KHDRBS3O75525 346 aaKnown RBP13.88□□□□□ -0.19
CLCN1-201ENST00000343257 EGFP01133 1207 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 RAB3BP20337 219 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 GSTM3P21266 225 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 PPP2R1BP30154 601 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 TRHRP34981 398 aaPredicted RBP13.88□□□□□ -0.19
CLCN1-201ENST00000343257 SLC11A1P49279 550 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 CLDN2P57739 230 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 OR12D2P58182 307 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 ACSM3Q53FZ2 586 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 TMEM88Q6PEY1 159 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 SORCS1Q8WY21 1168 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.88□□□□□ -0.19
CLCN1-201ENST00000343257 ZNF768Q9H5H4 540 aaKnown RBP13.88□□□□□ -0.19
CLCN1-201ENST00000343257 SCPEP1Q9HB40 452 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 ZNF175Q9Y473 711 aa13.88□□□□□ -0.19
CLCN1-201ENST00000343257 A0A0G2JK05 382 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 KRBOX1C9JBD0 128 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 INPPL1O15357 1258 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 SOCS5O75159 536 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 CLUP10909 449 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 F8A1P23610 371 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 PYCR1P32322 319 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 MAGEB1P43366 347 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 HES5Q5TA89 166 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 SLITRK4Q8IW52 837 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 BVESQ8NE79 360 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 PXYLP1Q8TE99 480 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 LINC01599Q8WXQ3 324 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 OR5P2Q8WZ92 322 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 LRRC46Q96FV0 321 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 C4orf36Q96KX1 117 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 PRRC1Q96M27 445 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 C12orf57Q99622 126 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 PRDM9Q9NQV7 894 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 PIPOXQ9P0Z9 390 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 KLHL42Q9P2K6 505 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 MCRIP1C9JLW8 97 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 FMO6PO60774 539 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 GCGRP47871 477 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 FAM110CQ1W6H9 321 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 SPOUT1Q5T280 376 aaKnown RBP13.87□□□□□ -0.19
CLCN1-201ENST00000343257 ELP2Q6IA86 826 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 CYB561A3Q8NBI2 242 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 TMEM255BQ8WV15 326 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 HERVK_113Q902F9 699 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 TM4SF18Q96CE8 201 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 TRMT61BQ9BVS5 477 aaKnown RBP13.87□□□□□ -0.19
CLCN1-201ENST00000343257 ENKD1Q9H0I2 346 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 EVA1AQ9H8M9 152 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 BACE2Q9Y5Z0 518 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 VWA8A3KMH1 1905 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 ANTXRLA6NF34 631 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 DNASE2O00115 360 aaPredicted RBP13.87□□□□□ -0.19
CLCN1-201ENST00000343257 SUSD5O60279 629 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 RP2O75695 350 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 HMGA1P17096 107 aaKnown RBP13.87□□□□□ -0.19
CLCN1-201ENST00000343257 CBX5P45973 191 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 IKZF1Q13422 519 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 OR52N1Q8NH53 320 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 OR52I2Q8NH67 350 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 DERL3Q96Q80 235 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 HRASLSQ9HDD0 168 aa13.87□□□□□ -0.19
CLCN1-201ENST00000343257 A0A1W2PS29 197 aa13.86□□□□□ -0.19
CLCN1-201ENST00000343257 PLSCR5A0PG75 271 aa13.86□□□□□ -0.19
CLCN1-201ENST00000343257 OR5F1O95221 314 aa13.86□□□□□ -0.19
CLCN1-201ENST00000343257 CCR9P51686 369 aa13.86□□□□□ -0.19
CLCN1-201ENST00000343257 SNRPD1P62314 119 aaKnown RBP13.86□□□□□ -0.19
CLCN1-201ENST00000343257 TSPAN31Q12999 210 aa13.86□□□□□ -0.19
CLCN1-201ENST00000343257 PGGHGQ32M88 737 aa13.86□□□□□ -0.19
CLCN1-201ENST00000343257 ZNF311Q5JNZ3 666 aa13.86□□□□□ -0.19
CLCN1-201ENST00000343257 NXPE4Q6UWF7 544 aa13.86□□□□□ -0.19
CLCN1-201ENST00000343257 SLC9B2Q86UD5 537 aa13.86□□□□□ -0.19
CLCN1-201ENST00000343257 ZNF433Q8N7K0 673 aaPredicted RBP13.86□□□□□ -0.19
CLCN1-201ENST00000343257 PIGXQ8TBF5 258 aa13.86□□□□□ -0.19
CLCN1-201ENST00000343257 LGALS14Q8TCE9 139 aa13.86□□□□□ -0.19
CLCN1-201ENST00000343257 ATOH1Q92858 354 aaPredicted RBP13.86□□□□□ -0.19
CLCN1-201ENST00000343257 WNT2BQ93097 391 aa13.86□□□□□ -0.19
CLCN1-201ENST00000343257 DPYSL5Q9BPU6 564 aa13.86□□□□□ -0.19
CLCN1-201ENST00000343257 NOX3Q9HBY0 568 aa13.86□□□□□ -0.19
CLCN1-201ENST00000343257 MRTO4Q9UKD2 239 aaKnown RBP13.86□□□□□ -0.19
CLCN1-201ENST00000343257 A8MXK9 166 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms