RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 LSM2Q9Y333 95 aaKnown RBP13.22□□□□□ -0.29
PCDH8-201ENST00000338862 SESN1Q9Y6P5 492 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 PRKNO60260 465 aaPredicted RBP13.22□□□□□ -0.29
PCDH8-201ENST00000338862 LDB3O75112 727 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 SOD1P00441 154 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 HLA-DQA2P01906 255 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 HSF2Q03933 536 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 OCLNQ16625 522 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 CLPPQ16740 277 aaPredicted RBP13.22□□□□□ -0.29
PCDH8-201ENST00000338862 PGGHGQ32M88 737 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 Q6ZNB5 142 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 ADIPOR2Q86V24 386 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 OR52E2Q8NGJ4 325 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 SENP5Q96HI0 755 aaPredicted RBP13.22□□□□□ -0.29
PCDH8-201ENST00000338862 ABHD1Q96SE0 405 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 DDOQ99489 341 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 MICU1Q9BPX6 476 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 AUNIPQ9H7T9 357 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 SYNPO2LQ9H987 977 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 UBQLN2Q9UHD9 624 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 KLHL21Q9UJP4 597 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 PCYT1BQ9Y5K3 369 aaPredicted RBP13.22□□□□□ -0.29
PCDH8-201ENST00000338862 FKBP7Q9Y680 259 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 SPAG17Q6Q759 2223 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 TRBV2A0A0J9YWF9 115 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 APOC3P02656 99 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 PCSK2P16519 638 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 VEGFCP49767 419 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 KIAA1024LP59773 190 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 ZNF770Q6IQ21 691 aaPredicted RBP13.22□□□□□ -0.29
PCDH8-201ENST00000338862 SFXN4Q6P4A7 337 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 GPR155Q7Z3F1 870 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 TCEAL8Q8IYN2 117 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 DNAJA4Q8WW22 397 aaPredicted RBP13.22□□□□□ -0.29
PCDH8-201ENST00000338862 GHSRQ92847 366 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 DTD2Q96FN9 168 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 ZSWIM3Q96MP5 696 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 ARHGAP9Q9BRR9 750 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 MS4A8Q9BY19 250 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 SEMA4CQ9C0C4 833 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 STOML2Q9UJZ1 356 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 PRAMEF27A3QJZ7 478 aa13.21□□□□□ -0.29
PCDH8-201ENST00000338862 LGALS8O00214 317 aa13.21□□□□□ -0.29
PCDH8-201ENST00000338862 FLRT2O43155 660 aa13.21□□□□□ -0.29
PCDH8-201ENST00000338862 SLC19A2O60779 497 aa13.21□□□□□ -0.29
PCDH8-201ENST00000338862 IRS1P35568 1242 aa13.21□□□□□ -0.29
PCDH8-201ENST00000338862 OAFQ86UD1 273 aa13.21□□□□□ -0.29
PCDH8-201ENST00000338862 OR14C36Q8NHC7 312 aa13.21□□□□□ -0.29
PCDH8-201ENST00000338862 NKD1Q969G9 470 aa13.21□□□□□ -0.29
PCDH8-201ENST00000338862 CAMK1GQ96NX5 476 aa13.21□□□□□ -0.29
PCDH8-201ENST00000338862 FOXN4Q96NZ1 517 aa13.21□□□□□ -0.29
PCDH8-201ENST00000338862 PCDHGB7Q9Y5F8 929 aa13.21□□□□□ -0.29
PCDH8-201ENST00000338862 RTTNQ86VV8 2226 aa13.21□□□□□ -0.29
PCDH8-201ENST00000338862 A0A1W2PRQ8 180 aa13.21□□□□□ -0.29
PCDH8-201ENST00000338862 AGAP14A8MT82 685 aa13.21□□□□□ -0.29
PCDH8-201ENST00000338862 SLC43A1O75387 559 aa13.21□□□□□ -0.29
PCDH8-201ENST00000338862 PSMA6P60900 246 aaKnown RBP13.21□□□□□ -0.29
PCDH8-201ENST00000338862 ZNF322Q6U7Q0 402 aaPredicted RBP13.21□□□□□ -0.29
PCDH8-201ENST00000338862 TMED4Q7Z7H5 227 aa13.21□□□□□ -0.29
PCDH8-201ENST00000338862 OR4D9Q8NGE8 314 aa13.21□□□□□ -0.29
PCDH8-201ENST00000338862 LCN9Q8WX39 176 aa13.21□□□□□ -0.29
PCDH8-201ENST00000338862 RSPH9Q9H1X1 276 aaPredicted RBP13.21□□□□□ -0.29
PCDH8-201ENST00000338862 SCN4AP35499 1836 aa13.21□□□□□ -0.3
PCDH8-201ENST00000338862 TBC1D3DA0A087WVF3 549 aa13.21□□□□□ -0.3
PCDH8-201ENST00000338862 TBC1D3IA0A087WXS9 549 aa13.21□□□□□ -0.3
PCDH8-201ENST00000338862 TBC1D3EA0A087X179 549 aa13.21□□□□□ -0.3
PCDH8-201ENST00000338862 TBC1D3KA0A087X1G2 549 aa13.21□□□□□ -0.3
PCDH8-201ENST00000338862 TRDV1A0A1B0GX56 115 aa13.21□□□□□ -0.3
PCDH8-201ENST00000338862 TBC1D3FA6NER0 549 aaPredicted RBP13.21□□□□□ -0.3
PCDH8-201ENST00000338862 HIDE1A8MVS5 230 aa13.21□□□□□ -0.3
PCDH8-201ENST00000338862 TBC1D3LB9A6J9 549 aa13.21□□□□□ -0.3
PCDH8-201ENST00000338862 AIFM1O95831 613 aa13.21□□□□□ -0.3
PCDH8-201ENST00000338862 TBC1D3HP0C7X1 549 aa13.21□□□□□ -0.3
PCDH8-201ENST00000338862 CSF2RAP15509 400 aa13.21□□□□□ -0.3
PCDH8-201ENST00000338862 F8A1P23610 371 aa13.21□□□□□ -0.3
PCDH8-201ENST00000338862 TEAD1P28347 426 aa13.21□□□□□ -0.3
PCDH8-201ENST00000338862 AGFG1P52594 562 aaKnown RBP13.21□□□□□ -0.3
PCDH8-201ENST00000338862 EEF1A2Q05639 463 aaKnown RBP13.21□□□□□ -0.3
PCDH8-201ENST00000338862 ZNF628Q5EBL2 1059 aa13.21□□□□□ -0.3
PCDH8-201ENST00000338862 TBC1D3GQ6DHY5 549 aa13.21□□□□□ -0.3
PCDH8-201ENST00000338862 TBC1D3CQ6IPX1 549 aa13.21□□□□□ -0.3
PCDH8-201ENST00000338862 HDDC2Q7Z4H3 204 aa13.21□□□□□ -0.3
PCDH8-201ENST00000338862 TBC1D3Q8IZP1 549 aaPredicted RBP13.21□□□□□ -0.3
PCDH8-201ENST00000338862 SRFBP1Q8NEF9 429 aaKnown RBP13.21□□□□□ -0.3
PCDH8-201ENST00000338862 TRMT2BQ96GJ1 504 aaKnown RBP13.21□□□□□ -0.3
PCDH8-201ENST00000338862 PAWRQ96IZ0 340 aaKnown RBP13.21□□□□□ -0.3
PCDH8-201ENST00000338862 RNF32Q9H0A6 362 aa13.21□□□□□ -0.3
PCDH8-201ENST00000338862 UBQLN3Q9H347 655 aa13.21□□□□□ -0.3
PCDH8-201ENST00000338862 RANBP3Q9H6Z4 567 aaPredicted RBP13.21□□□□□ -0.3
PCDH8-201ENST00000338862 POLHQ9Y253 713 aa13.21□□□□□ -0.3
PCDH8-201ENST00000338862 OTOFQ9HC10 1997 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 LRRN3E7EW58 273 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 BLOC1S5-TXNDC5H3BN57 136 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 TFP02787 698 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 LIPCP11150 499 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 HLA-DMAP28067 261 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 BSGP35613 385 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 MMP12P39900 470 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 CLDN20P56880 219 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 TSPAN31Q12999 210 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms