RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 INPP5KQ9BT40 448 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 CALHM2Q9HA72 323 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 SDR39U1Q9NRG7 319 aaPredicted RBP13.8□□□□□ -0.2
PRKN-201ENST00000338468 ZNF446Q9NWS9 450 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 BTNL2Q9UIR0 455 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 ZNF337Q9Y3M9 751 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 OR2M5A3KFT3 312 aa13.79□□□□□ -0.2
PRKN-201ENST00000338468 MBD3L4A6NDZ8 208 aaPredicted RBP13.79□□□□□ -0.2
PRKN-201ENST00000338468 MBD3L3A6NE82 208 aaPredicted RBP13.79□□□□□ -0.2
PRKN-201ENST00000338468 MBD3L5A6NJ08 208 aaPredicted RBP13.79□□□□□ -0.2
PRKN-201ENST00000338468 SHISA8B8ZZ34 492 aa13.79□□□□□ -0.2
PRKN-201ENST00000338468 OIP5O43482 229 aa13.79□□□□□ -0.2
PRKN-201ENST00000338468 DIAPH2O60879 1101 aa13.79□□□□□ -0.2
PRKN-201ENST00000338468 SOX30O94993 753 aa13.79□□□□□ -0.2
PRKN-201ENST00000338468 IDO1P14902 403 aa13.79□□□□□ -0.2
PRKN-201ENST00000338468 IGFBP2P18065 325 aa13.79□□□□□ -0.2
PRKN-201ENST00000338468 GCKP35557 465 aa13.79□□□□□ -0.2
PRKN-201ENST00000338468 CDKN2CP42773 168 aa13.79□□□□□ -0.2
PRKN-201ENST00000338468 RNF144AP50876 292 aaPredicted RBP13.79□□□□□ -0.2
PRKN-201ENST00000338468 ZNF136P52737 540 aa13.79□□□□□ -0.2
PRKN-201ENST00000338468 FUT5Q11128 374 aa13.79□□□□□ -0.2
PRKN-201ENST00000338468 BCL2A1Q16548 175 aa13.79□□□□□ -0.2
PRKN-201ENST00000338468 GLYR1Q49A26 553 aaPredicted RBP13.79□□□□□ -0.2
PRKN-201ENST00000338468 HEPHL1Q6MZM0 1159 aa13.79□□□□□ -0.2
PRKN-201ENST00000338468 C9orf106Q8NAJ2 232 aa13.79□□□□□ -0.2
PRKN-201ENST00000338468 RELL2Q8NC24 303 aaPredicted RBP13.79□□□□□ -0.2
PRKN-201ENST00000338468 VPS37AQ8NEZ2 397 aa13.79□□□□□ -0.2
PRKN-201ENST00000338468 MBD3L2Q8NHZ7 208 aaPredicted RBP13.79□□□□□ -0.2
PRKN-201ENST00000338468 NEURL3Q96EH8 262 aa13.79□□□□□ -0.2
PRKN-201ENST00000338468 DTNBP1Q96EV8 351 aa13.79□□□□□ -0.2
PRKN-201ENST00000338468 UCN2Q96RP3 112 aa13.79□□□□□ -0.2
PRKN-201ENST00000338468 OR51I1Q9H343 314 aa13.79□□□□□ -0.2
PRKN-201ENST00000338468 PTGES2Q9H7Z7 377 aa13.79□□□□□ -0.2
PRKN-201ENST00000338468 KCNJ16Q9NPI9 418 aa13.79□□□□□ -0.2
PRKN-201ENST00000338468 INTS9Q9NV88 658 aaKnown RBP13.79□□□□□ -0.2
PRKN-201ENST00000338468 KCNE5Q9UJ90 142 aa13.79□□□□□ -0.2
PRKN-201ENST00000338468 PCDHGB4Q9UN71 923 aa13.79□□□□□ -0.2
PRKN-201ENST00000338468 MED13LQ71F56 2210 aa13.79□□□□□ -0.2
PRKN-201ENST00000338468 DOCK7Q96N67 2140 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 CENPVL1A0A0U1RR11 272 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 PRAMEF27A3QJZ7 478 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 CLCA1A8K7I4 914 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 HSPB2A8KAH6 182 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 FAM47E-STBD1D6RA91 191 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 H0Y3Z8 333 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 H0YC42 278 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 SCDO00767 359 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 UBDO15205 165 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 FCMRO60667 390 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 ATP6V1C1P21283 382 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 MSX1P28360 303 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 IDH3AP50213 366 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 SUCLG1P53597 346 aaKnown RBP13.78□□□□□ -0.2
PRKN-201ENST00000338468 ATP12AP54707 1039 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 TPD52P55327 224 aaPredicted RBP13.78□□□□□ -0.2
PRKN-201ENST00000338468 HSPB2Q16082 182 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 GSTA3Q16772 222 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 FLYWCH1Q4VC44 716 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 RAET1LQ5VY80 246 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 SPNS3Q6ZMD2 512 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 ZNF295-AS1Q8N0V1 137 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 GOLGA6L1Q8N7Z2 621 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 GLB1L3Q8NCI6 653 aaPredicted RBP13.78□□□□□ -0.2
PRKN-201ENST00000338468 OR9I1Q8NGQ6 314 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 CKAP2Q8WWK9 683 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 RAB8BQ92930 207 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 SH3YL1Q96HL8 342 aaPredicted RBP13.78□□□□□ -0.2
PRKN-201ENST00000338468 OR52E6Q96RD3 313 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 SPOCK3Q9BQ16 436 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 EBF4Q9BQW3 602 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 SLC35A5Q9BS91 424 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 HOXD1Q9GZZ0 328 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 SLC6A13Q9NSD5 602 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 ZIM2Q9NZV7 527 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 CLCF1Q9UBD9 225 aa13.78□□□□□ -0.2
PRKN-201ENST00000338468 CCDC154A6NI56 674 aa13.77□□□□□ -0.21
PRKN-201ENST00000338468 DUXAA6NLW8 204 aa13.77□□□□□ -0.21
PRKN-201ENST00000338468 HCRTR2O43614 444 aa13.77□□□□□ -0.21
PRKN-201ENST00000338468 SLC22A3O75751 556 aa13.77□□□□□ -0.21
PRKN-201ENST00000338468 TGDSO95455 350 aa13.77□□□□□ -0.21
PRKN-201ENST00000338468 GSNP06396 782 aa13.77□□□□□ -0.21
PRKN-201ENST00000338468 OR12D1P0DN82 309 aa13.77□□□□□ -0.21
PRKN-201ENST00000338468 HPGDP15428 266 aa13.77□□□□□ -0.21
PRKN-201ENST00000338468 CAPN3P20807 821 aa13.77□□□□□ -0.21
PRKN-201ENST00000338468 PSMA4P25789 261 aaKnown RBP13.77□□□□□ -0.21
PRKN-201ENST00000338468 CLDN20P56880 219 aa13.77□□□□□ -0.21
PRKN-201ENST00000338468 ZNF117Q03924 483 aa13.77□□□□□ -0.21
PRKN-201ENST00000338468 RCAN2Q14206 197 aa13.77□□□□□ -0.21
PRKN-201ENST00000338468 SF3B4Q15427 424 aaKnown RBP eCLIP13.77□□□□□ -0.21
PRKN-201ENST00000338468 TESK1Q15569 626 aa13.77□□□□□ -0.21
PRKN-201ENST00000338468 SLC25A35Q3KQZ1 300 aa13.77□□□□□ -0.21
PRKN-201ENST00000338468 ARHGAP11BQ3KRB8 267 aa13.77□□□□□ -0.21
PRKN-201ENST00000338468 AP1ARQ63HQ0 302 aa13.77□□□□□ -0.21
PRKN-201ENST00000338468 TNFAIP8L2Q6P589 184 aaPredicted RBP13.77□□□□□ -0.21
PRKN-201ENST00000338468 CBLN3Q6UW01 205 aa13.77□□□□□ -0.21
PRKN-201ENST00000338468 CDH24Q86UP0 819 aa13.77□□□□□ -0.21
PRKN-201ENST00000338468 MISPQ8IVT2 679 aa13.77□□□□□ -0.21
PRKN-201ENST00000338468 POC1BQ8TC44 478 aa13.77□□□□□ -0.21
PRKN-201ENST00000338468 ZNF524Q96C55 264 aa13.77□□□□□ -0.21
PRKN-201ENST00000338468 PANX1Q96RD7 426 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms