RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 KLHL15Q96M94 604 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 SLC16A6O15403 523 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 RFPL3O75679 317 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 PTHP01270 115 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 ACP2P11117 423 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 PSMB5P28074 263 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 CD34P28906 385 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 IMPA1P29218 277 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 MTFR2Q6P444 385 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 CUEDC1Q9NWM3 386 aaPredicted RBP12.93□□□□□ -0.34
RTN4-202ENST00000337526 KCMF1Q9P0J7 381 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 F5P12259 2224 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 TRBV4-1A0A0J9YWV2 114 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 C1SP09871 688 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 RHEBQ15382 184 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 PGGHGQ32M88 737 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 CCNJQ5T5M9 372 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 P4HA3Q7Z4N8 544 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 SLC38A5Q8WUX1 472 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 MAFIPQ8WZ33 124 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 SLC7A11Q9UPY5 501 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 ENTPD2Q9Y5L3 495 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 NAP1L6A6NFF2 107 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 FOXE1O00358 373 aaPredicted RBP12.92□□□□□ -0.34
RTN4-202ENST00000337526 NPC1O15118 1278 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 LDB3O75112 727 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 ADH6P28332 368 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 PLP2Q04941 152 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 ENTPD8Q5MY95 495 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 GSG1LQ6UXU4 331 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 FAM83HQ6ZRV2 1179 aaPredicted RBP12.92□□□□□ -0.34
RTN4-202ENST00000337526 VRK2Q86Y07 508 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 BMFQ96LC9 184 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 APOOQ9BUR5 198 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 NT5DC2Q9H857 520 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 C2orf42Q9NWW7 574 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 HIF3AQ9Y2N7 669 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 CRYBG1Q9Y4K1 1723 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 ACOT7O00154 380 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 RAD1O60671 282 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 PIGAP37287 484 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 PSMB10P40306 273 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 DSC1Q08554 894 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 NKPD1Q17RQ9 610 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 TCTE1Q5JU00 501 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 CHRDL2Q6WN34 429 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 NLGN4XQ8N0W4 816 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 ZNF417Q8TAU3 575 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 BADQ92934 168 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 C4orf36Q96KX1 117 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 CWH43Q9H720 699 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 OR6C2Q9NZP2 312 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 AKAP11Q9UKA4 1901 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 ZNF850A8MQ14 1090 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 ARPC1BO15143 372 aaKnown RBP12.92□□□□□ -0.34
RTN4-202ENST00000337526 PRAF2O60831 178 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 RAB3DO95716 219 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 HNRNPA2B1P22626 353 aaKnown RBP12.92□□□□□ -0.34
RTN4-202ENST00000337526 GIFP27352 417 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 ZMYND11Q15326 602 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 SAMD11Q96NU1 681 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 SLC25A18Q9H1K4 315 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 SLC33A1O00400 549 aaPredicted RBP12.92□□□□□ -0.34
RTN4-202ENST00000337526 ANKRD28O15084 1053 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 DUX1O43812 170 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 SEC14L2O76054 403 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 THEGLP0DJG4 465 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 SERTAD2Q14140 314 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 KIR2DS3Q14952 304 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 COMMD7Q86VX2 200 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 LRRC28Q86X40 367 aaPredicted RBP12.92□□□□□ -0.34
RTN4-202ENST00000337526 ZNF740Q8NDX6 193 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 SFXN5Q8TD22 340 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 HOXB13Q92826 284 aaPredicted RBP12.92□□□□□ -0.34
RTN4-202ENST00000337526 MR1Q95460 341 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 OR7D2Q96RA2 312 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 CENPOQ9BU64 300 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 MRI1Q9BV20 369 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 COQ3Q9NZJ6 369 aa12.92□□□□□ -0.34
RTN4-202ENST00000337526 RDH16O75452 317 aa12.91□□□□□ -0.34
RTN4-202ENST00000337526 GABARAPO95166 117 aa12.91□□□□□ -0.34
RTN4-202ENST00000337526 SEMA4FO95754 770 aa12.91□□□□□ -0.34
RTN4-202ENST00000337526 SMIM18P0DKX4 95 aa12.91□□□□□ -0.34
RTN4-202ENST00000337526 ACPPP15309 386 aa12.91□□□□□ -0.34
RTN4-202ENST00000337526 POU3F4P49335 361 aa12.91□□□□□ -0.34
RTN4-202ENST00000337526 CAV3P56539 151 aa12.91□□□□□ -0.34
RTN4-202ENST00000337526 STEAP3Q658P3 488 aa12.91□□□□□ -0.34
RTN4-202ENST00000337526 CFAP77Q6ZQR2 320 aa12.91□□□□□ -0.34
RTN4-202ENST00000337526 TMEM151BQ8IW70 566 aa12.91□□□□□ -0.34
RTN4-202ENST00000337526 LRRC56Q8IYG6 542 aaPredicted RBP12.91□□□□□ -0.34
RTN4-202ENST00000337526 GTPBP8Q8N3Z3 284 aaPredicted RBP12.91□□□□□ -0.34
RTN4-202ENST00000337526 OR5L2Q8NGL0 311 aa12.91□□□□□ -0.34
RTN4-202ENST00000337526 OR2A12Q8NGT7 310 aa12.91□□□□□ -0.34
RTN4-202ENST00000337526 TANKQ92844 425 aa12.91□□□□□ -0.34
RTN4-202ENST00000337526 ACTR10Q9NZ32 417 aa12.91□□□□□ -0.34
RTN4-202ENST00000337526 HS3ST2Q9Y278 367 aa12.91□□□□□ -0.34
RTN4-202ENST00000337526 ASCC3Q8N3C0 2202 aaKnown RBP12.91□□□□□ -0.34
RTN4-202ENST00000337526 SYPP08247 313 aa12.91□□□□□ -0.34
RTN4-202ENST00000337526 PNMTP11086 282 aa12.91□□□□□ -0.34
RTN4-202ENST00000337526 GPX2P18283 190 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms