RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 ZNF534Q76KX8 674 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 BOLLQ8N9W6 283 aaKnown RBP13.11□□□□□ -0.31
PRKCB-201ENST00000303531 OR51T1Q8NGJ9 327 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 CNOT2Q9NZN8 540 aaKnown RBP13.11□□□□□ -0.31
PRKCB-201ENST00000303531 SYPP08247 313 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 CDK4P11802 303 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 OTX2P32243 289 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 SFTPDP35247 375 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 SRYQ05066 204 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 KIR2DS3Q14952 304 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 ACSM3Q53FZ2 586 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 Q6ZSR6 202 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 RBM24Q9BX46 236 aaKnown RBP13.11□□□□□ -0.31
PRKCB-201ENST00000303531 PSMB5P28074 263 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 SLC6A8P48029 635 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 ERVK-25P63136 954 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 TAP2Q03519 686 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 ELP2Q6IA86 826 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 OR14L1PQ8NHC6 308 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 PITHD1Q9GZP4 211 aaPredicted RBP13.11□□□□□ -0.31
PRKCB-201ENST00000303531 B3GALT1Q9Y5Z6 326 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 J3KTA2 159 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 HTR3BO95264 441 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 KNG1P01042 644 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 UBL4AP11441 157 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 MSX1P28360 303 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 AQP2P41181 271 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 CXCR4P61073 352 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 CYP4V2Q6ZWL3 525 aaPredicted RBP13.11□□□□□ -0.31
PRKCB-201ENST00000303531 RBM12BQ8IXT5 1001 aaKnown RBP13.11□□□□□ -0.31
PRKCB-201ENST00000303531 GTPBP8Q8N3Z3 284 aaPredicted RBP13.11□□□□□ -0.31
PRKCB-201ENST00000303531 NLGN4YQ8NFZ3 816 aaPredicted RBP13.11□□□□□ -0.31
PRKCB-201ENST00000303531 ZNF417Q8TAU3 575 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 FAM71F1Q96KD3 344 aaPredicted RBP13.11□□□□□ -0.31
PRKCB-201ENST00000303531 C1QTNF2Q9BXJ5 285 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 HPGDSO60760 199 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 TIMP1P01033 207 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 IFNA1P01562 189 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 GYPBP06028 91 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 KCTD20Q7Z5Y7 419 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 SERPINA12Q8IW75 414 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 ELMOD3Q96FG2 381 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 NECTIN4Q96NY8 510 aa13.11□□□□□ -0.31
PRKCB-201ENST00000303531 TRAV27A0A087WT01 109 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 F5H5P2 479 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 CDK2P24941 298 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 CSNK1DP48730 415 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 SPCS2Q15005 226 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 KIAA1211LQ6NV74 962 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 OR52R1Q8NGF1 315 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 ACOT11Q8WXI4 607 aaPredicted RBP13.1□□□□□ -0.31
PRKCB-201ENST00000303531 ZNF486Q96H40 463 aaPredicted RBP13.1□□□□□ -0.31
PRKCB-201ENST00000303531 C4orf36Q96KX1 117 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 COQ10AQ96MF6 247 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 SLC46A2Q9BY10 475 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 AP1M2Q9Y6Q5 423 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 TIAM2Q8IVF5 1701 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 ZBTB42B2RXF5 422 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 PRLHRP49683 370 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 AKR1C2P52895 323 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 GPR157Q5UAW9 335 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 ZNF852Q6ZMS4 543 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 VRK2Q86Y07 508 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 SYNPRQ8TBG9 265 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 PDLIM5Q96HC4 596 aaKnown RBP13.1□□□□□ -0.31
PRKCB-201ENST00000303531 OR52D1Q9H346 318 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 LHX3Q9UBR4 397 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 NAALAD2Q9Y3Q0 740 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 LAMB4A4D0S4 1761 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 BRINP1O60477 761 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 ADAMTS4O75173 837 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 SPDEFO95238 335 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 RAB3DO95716 219 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 OR8U9P0C7N5 309 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 AHRP35869 848 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 RPS15P62841 145 aaKnown RBP13.1□□□□□ -0.31
PRKCB-201ENST00000303531 HBA1P69905 142 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 IRF4Q15306 451 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 ENTPD8Q5MY95 495 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 TMEM174Q8WUU8 243 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 GGHQ92820 318 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 OR7D2Q96RA2 312 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 VDAC3Q9Y277 283 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 FTCDNL1E5RQL4 147 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 MPIG6BO95866 241 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 EXOSC7Q15024 291 aaKnown RBP13.1□□□□□ -0.31
PRKCB-201ENST00000303531 PAQR9Q6ZVX9 377 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 NOXA1Q86UR1 476 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 ZSCAN1Q8NBB4 408 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 TMEM163Q8TC26 289 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 ADAMTS16Q8TE57 1224 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 SLA2Q9H6Q3 261 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 SQSTM1Q13501 440 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 CCNJQ5T5M9 372 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 ZNF704Q6ZNC4 412 aaPredicted RBP13.1□□□□□ -0.31
PRKCB-201ENST00000303531 FAM3CQ92520 227 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 SYT3Q9BQG1 590 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 PBDC1Q9BVG4 233 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 ARPC1BO15143 372 aaKnown RBP13.1□□□□□ -0.31
PRKCB-201ENST00000303531 DSC1Q08554 894 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms