RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 PRODH2Q9UF12 536 aa19.31■□□□□ 0.68
SMCO4-201ENST00000298966 PEX1O43933 1283 aa19.3■□□□□ 0.68
SMCO4-201ENST00000298966 IFNA16P05015 189 aa19.3■□□□□ 0.68
SMCO4-201ENST00000298966 NUDT7P0C024 238 aa19.3■□□□□ 0.68
SMCO4-201ENST00000298966 RAP2AP10114 183 aa19.3■□□□□ 0.68
SMCO4-201ENST00000298966 ZNF24P17028 368 aa19.3■□□□□ 0.68
SMCO4-201ENST00000298966 IGFBP2P18065 325 aa19.3■□□□□ 0.68
SMCO4-201ENST00000298966 MAOAP21397 527 aa19.3■□□□□ 0.68
SMCO4-201ENST00000298966 DNAJA1P31689 397 aaKnown RBP19.3■□□□□ 0.68
SMCO4-201ENST00000298966 MAN2A2P49641 1150 aa19.3■□□□□ 0.68
SMCO4-201ENST00000298966 ZNHIT3Q15649 155 aaPredicted RBP19.3■□□□□ 0.68
SMCO4-201ENST00000298966 EXT1Q16394 746 aa19.3■□□□□ 0.68
SMCO4-201ENST00000298966 FAM111BQ6SJ93 734 aa19.3■□□□□ 0.68
SMCO4-201ENST00000298966 EIF3MQ7L2H7 374 aaKnown RBP19.3■□□□□ 0.68
SMCO4-201ENST00000298966 KRT73Q86Y46 540 aa19.3■□□□□ 0.68
SMCO4-201ENST00000298966 CHERPQ8IWX8 916 aaKnown RBP19.3■□□□□ 0.68
SMCO4-201ENST00000298966 LILRA2Q8N149 483 aa19.3■□□□□ 0.68
SMCO4-201ENST00000298966 CHDHQ8NE62 594 aaPredicted RBP19.3■□□□□ 0.68
SMCO4-201ENST00000298966 BBS10Q8TAM1 723 aa19.3■□□□□ 0.68
SMCO4-201ENST00000298966 SLC38A5Q8WUX1 472 aa19.3■□□□□ 0.68
SMCO4-201ENST00000298966 ASB5Q8WWX0 329 aa19.3■□□□□ 0.68
SMCO4-201ENST00000298966 OR7D2Q96RA2 312 aa19.3■□□□□ 0.68
SMCO4-201ENST00000298966 ZNF607Q96SK3 696 aa19.3■□□□□ 0.68
SMCO4-201ENST00000298966 PKP2Q99959 881 aa19.3■□□□□ 0.68
SMCO4-201ENST00000298966 BTBD2Q9BX70 525 aa19.3■□□□□ 0.68
SMCO4-201ENST00000298966 PIGUQ9H490 435 aa19.3■□□□□ 0.68
SMCO4-201ENST00000298966 SERHL2Q9H4I8 314 aa19.3■□□□□ 0.68
SMCO4-201ENST00000298966 AURKCQ9UQB9 309 aa19.3■□□□□ 0.68
SMCO4-201ENST00000298966 AKAP6Q13023 2319 aa19.29■□□□□ 0.68
SMCO4-201ENST00000298966 TGFBR3LH3BV60 316 aa19.29■□□□□ 0.68
SMCO4-201ENST00000298966 SERPINA1P01009 418 aa19.29■□□□□ 0.68
SMCO4-201ENST00000298966 GUSBP08236 651 aa19.29■□□□□ 0.68
SMCO4-201ENST00000298966 ALOX5P09917 674 aa19.29■□□□□ 0.68
SMCO4-201ENST00000298966 OR12D1P0DN82 309 aa19.29■□□□□ 0.68
SMCO4-201ENST00000298966 NR2F1P10589 423 aa19.29■□□□□ 0.68
SMCO4-201ENST00000298966 ETS2P15036 469 aa19.29■□□□□ 0.68
SMCO4-201ENST00000298966 TNNI3P19429 210 aa19.29■□□□□ 0.68
SMCO4-201ENST00000298966 TRMT12Q53H54 448 aaKnown RBP19.29■□□□□ 0.68
SMCO4-201ENST00000298966 TGIF2LYQ8IUE0 185 aa19.29■□□□□ 0.68
SMCO4-201ENST00000298966 SLC5A8Q8N695 610 aa19.29■□□□□ 0.68
SMCO4-201ENST00000298966 NFKBIDQ8NI38 313 aa19.29■□□□□ 0.68
SMCO4-201ENST00000298966 M1APQ8TC57 530 aa19.29■□□□□ 0.68
SMCO4-201ENST00000298966 XAGE5Q8WWM1 108 aa19.29■□□□□ 0.68
SMCO4-201ENST00000298966 PYURFQ96I23 114 aa19.29■□□□□ 0.68
SMCO4-201ENST00000298966 FBXL20Q96IG2 436 aa19.29■□□□□ 0.68
SMCO4-201ENST00000298966 TRNT1Q96Q11 434 aaKnown RBP19.29■□□□□ 0.68
SMCO4-201ENST00000298966 TRIM45Q9H8W5 580 aaPredicted RBP19.29■□□□□ 0.68
SMCO4-201ENST00000298966 A0A0G2JPF8 293 aa19.28■□□□□ 0.68
SMCO4-201ENST00000298966 HNRNPCL2B2RXH8 293 aa19.28■□□□□ 0.68
SMCO4-201ENST00000298966 HNRNPCL3B7ZW38 293 aa19.28■□□□□ 0.68
SMCO4-201ENST00000298966 SERPINB7O75635 380 aa19.28■□□□□ 0.68
SMCO4-201ENST00000298966 CBX7O95931 251 aa19.28■□□□□ 0.68
SMCO4-201ENST00000298966 BCHEP06276 602 aa19.28■□□□□ 0.68
SMCO4-201ENST00000298966 HNRNPCL4P0DMR1 293 aa19.28■□□□□ 0.68
SMCO4-201ENST00000298966 IST1P53990 364 aa19.28■□□□□ 0.68
SMCO4-201ENST00000298966 RPS26P62854 115 aaKnown RBP19.28■□□□□ 0.68
SMCO4-201ENST00000298966 PSPHP78330 225 aa19.28■□□□□ 0.68
SMCO4-201ENST00000298966 TRIP10Q15642 601 aa19.28■□□□□ 0.68
SMCO4-201ENST00000298966 NSDHLQ15738 373 aa19.28■□□□□ 0.68
SMCO4-201ENST00000298966 LRRC23Q53EV4 343 aaPredicted RBP19.28■□□□□ 0.68
SMCO4-201ENST00000298966 OGFRL1Q5TC84 451 aaPredicted RBP19.28■□□□□ 0.68
SMCO4-201ENST00000298966 TMEM211Q6ICI0 200 aa19.28■□□□□ 0.68
SMCO4-201ENST00000298966 HEPHL1Q6MZM0 1159 aa19.28■□□□□ 0.68
SMCO4-201ENST00000298966 ANKRD37Q7Z713 158 aa19.28■□□□□ 0.68
SMCO4-201ENST00000298966 MORN4Q8NDC4 146 aa19.28■□□□□ 0.68
SMCO4-201ENST00000298966 MAL2Q969L2 176 aa19.28■□□□□ 0.68
SMCO4-201ENST00000298966 PPWD1Q96BP3 646 aaKnown RBP19.28■□□□□ 0.68
SMCO4-201ENST00000298966 TMEM19Q96HH6 336 aa19.28■□□□□ 0.68
SMCO4-201ENST00000298966 LMF2Q9BU23 707 aaKnown RBP19.28■□□□□ 0.68
SMCO4-201ENST00000298966 MMP25Q9NPA2 562 aa19.28■□□□□ 0.68
SMCO4-201ENST00000298966 NPDC1Q9NQX5 325 aaPredicted RBP19.28■□□□□ 0.68
SMCO4-201ENST00000298966 POLE3Q9NRF9 147 aa19.28■□□□□ 0.68
SMCO4-201ENST00000298966 LRFN1Q9P244 771 aa19.28■□□□□ 0.68
SMCO4-201ENST00000298966 CLCA3PQ9Y6N3 262 aa19.28■□□□□ 0.68
SMCO4-201ENST00000298966 DNHD1Q96M86 4753 aa19.27■□□□□ 0.68
SMCO4-201ENST00000298966 FAM90A27PA6NNH2 459 aa19.27■□□□□ 0.68
SMCO4-201ENST00000298966 C17orf105B2RV13 164 aa19.27■□□□□ 0.68
SMCO4-201ENST00000298966 NEURL1O76050 574 aa19.27■□□□□ 0.68
SMCO4-201ENST00000298966 PGM3O95394 542 aa19.27■□□□□ 0.68
SMCO4-201ENST00000298966 TPOP07202 933 aa19.27■□□□□ 0.68
SMCO4-201ENST00000298966 CT62P0C5K7 136 aa19.27■□□□□ 0.68
SMCO4-201ENST00000298966 S1PR1P21453 382 aa19.27■□□□□ 0.68
SMCO4-201ENST00000298966 FASP25445 335 aa19.27■□□□□ 0.68
SMCO4-201ENST00000298966 PTGS2P35354 604 aa19.27■□□□□ 0.68
SMCO4-201ENST00000298966 SOX18P35713 384 aa19.27■□□□□ 0.68
SMCO4-201ENST00000298966 MAP3K8P41279 467 aa19.27■□□□□ 0.68
SMCO4-201ENST00000298966 SELENOWP63302 87 aa19.27■□□□□ 0.68
SMCO4-201ENST00000298966 HPCAP84074 193 aa19.27■□□□□ 0.68
SMCO4-201ENST00000298966 C16orf62Q7Z3J2 963 aa19.27■□□□□ 0.68
SMCO4-201ENST00000298966 FGD2Q7Z6J4 655 aa19.27■□□□□ 0.68
SMCO4-201ENST00000298966 OR52R1Q8NGF1 315 aa19.27■□□□□ 0.68
SMCO4-201ENST00000298966 RAB8BQ92930 207 aa19.27■□□□□ 0.68
SMCO4-201ENST00000298966 FOXC2Q99958 501 aa19.27■□□□□ 0.68
SMCO4-201ENST00000298966 KCNN3Q9UGI6 736 aa19.27■□□□□ 0.68
SMCO4-201ENST00000298966 MAN1A2O60476 641 aa19.26■□□□□ 0.67
SMCO4-201ENST00000298966 TIPRLO75663 272 aa19.26■□□□□ 0.67
SMCO4-201ENST00000298966 NKX2-2O95096 273 aa19.26■□□□□ 0.67
SMCO4-201ENST00000298966 CHRNB4P30926 498 aa19.26■□□□□ 0.67
SMCO4-201ENST00000298966 CASP9P55211 416 aa19.26■□□□□ 0.67
SMCO4-201ENST00000298966 ZNF267Q14586 743 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms