RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 ZER1Q7Z7L7 766 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 SPARTQ8N0X7 666 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 SLC41A3Q96GZ6 507 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 SENP5Q96HI0 755 aaPredicted RBP13.2□□□□□ -0.3
C9orf3-202ENST00000297979 G6PC3Q9BUM1 346 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 POLR2J2Q9GZM3 115 aaKnown RBP13.2□□□□□ -0.3
C9orf3-202ENST00000297979 IMPAD1Q9NX62 359 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 OR10H1Q9Y4A9 318 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 CEPT1Q9Y6K0 416 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 FAM20BO75063 409 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 POU1F1P28069 291 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 IFNGR2P38484 337 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 DUSP3P51452 185 aaPredicted RBP13.19□□□□□ -0.3
C9orf3-202ENST00000297979 NNATQ16517 81 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 SMN1Q16637 294 aaKnown RBP13.19□□□□□ -0.3
C9orf3-202ENST00000297979 ZBED5Q49AG3 693 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 ZNF730Q6ZMV8 503 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 P3H2Q8IVL5 708 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 NODALQ96S42 347 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 CBLCQ9ULV8 474 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 TCRBV16S1A1N1A0A5B0 115 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 A8MUA0 341 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 SOX14O95416 240 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 GSTT2P0CG29 244 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 GSTT2BP0CG30 244 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 CSNK2BP67870 215 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 TEKQ02763 1124 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 PMS2P3Q13401 168 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 ELAVL1Q15717 326 aaKnown RBP13.19□□□□□ -0.3
C9orf3-202ENST00000297979 PDZK1Q5T2W1 519 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 TMEM236Q5W0B7 351 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 GDF7Q7Z4P5 450 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 RHOXF1Q8NHV9 184 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 NDEL1Q9GZM8 345 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 EVA1AQ9H8M9 152 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 ZNF226Q9NYT6 803 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 RARRES3Q9UL19 164 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 PCDHGA10Q9Y5H3 936 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 CLCA3PQ9Y6N3 262 aa13.19□□□□□ -0.3
C9orf3-202ENST00000297979 TRAV6A0A075B6T7 132 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 H3BN98 237 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 H3BSA7 217 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 JUNBP17275 347 aaPredicted RBP13.18□□□□□ -0.3
C9orf3-202ENST00000297979 RNF144AP50876 292 aaPredicted RBP13.18□□□□□ -0.3
C9orf3-202ENST00000297979 EFNA3P52797 238 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 SLC37A1P57057 533 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 SLC35A2P78381 396 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 LSM11P83369 360 aaKnown RBP eCLIP13.18□□□□□ -0.3
C9orf3-202ENST00000297979 ALDH6A1Q02252 535 aaKnown RBP13.18□□□□□ -0.3
C9orf3-202ENST00000297979 PIGFQ07326 219 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 BCL2A1Q16548 175 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 DECR1Q16698 335 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 PRR23CQ6ZRP0 262 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 PRSS58Q8IYP2 241 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 ZNF614Q8N883 585 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 TOR1AIP2Q8NFQ8 470 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 ACOT11Q8WXI4 607 aaPredicted RBP13.18□□□□□ -0.3
C9orf3-202ENST00000297979 DUSP21Q9H596 190 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 TESQ9UGI8 421 aaKnown RBP13.18□□□□□ -0.3
C9orf3-202ENST00000297979 FER1L5A0AVI2 2057 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 AGRPO00253 132 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 FMO6PO60774 539 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 TMCC2O75069 709 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 THY1P04216 161 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 GKN3PP0CG01 181 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 PRG2P13727 222 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 GSTM3P21266 225 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 TTKP33981 857 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 RAB39AQ14964 217 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 COX15Q7KZN9 410 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 RRM2BQ7LG56 351 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 BCORP1Q8N888 145 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 ZNF540Q8NDQ6 660 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 SLC46A1Q96NT5 459 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 GFM1Q96RP9 751 aaKnown RBP13.18□□□□□ -0.3
C9orf3-202ENST00000297979 TUBA1CQ9BQE3 449 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 OR8D2Q9GZM6 311 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 VN1R1Q9GZP7 353 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 CCDC90BQ9GZT6 254 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 TPK1Q9H3S4 243 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 CCNB1IP1Q9NPC3 277 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 SIDT1Q9NXL6 827 aaKnown RBP13.18□□□□□ -0.3
C9orf3-202ENST00000297979 CTSFQ9UBX1 484 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 SLC7A7Q9UM01 511 aa13.18□□□□□ -0.3
C9orf3-202ENST00000297979 GABRB1P18505 474 aa13.17□□□□□ -0.3
C9orf3-202ENST00000297979 HTR2AP28223 471 aa13.17□□□□□ -0.3
C9orf3-202ENST00000297979 PSMD4P55036 377 aaKnown RBP13.17□□□□□ -0.3
C9orf3-202ENST00000297979 NSDHLQ15738 373 aa13.17□□□□□ -0.3
C9orf3-202ENST00000297979 ZNF141Q15928 474 aa13.17□□□□□ -0.3
C9orf3-202ENST00000297979 XAF1Q6GPH4 301 aa13.17□□□□□ -0.3
C9orf3-202ENST00000297979 NKAIN4Q8IVV8 208 aa13.17□□□□□ -0.3
C9orf3-202ENST00000297979 CCDC103Q8IW40 242 aa13.17□□□□□ -0.3
C9orf3-202ENST00000297979 ZNF321PQ8N8H1 164 aa13.17□□□□□ -0.3
C9orf3-202ENST00000297979 PIGXQ8TBF5 258 aa13.17□□□□□ -0.3
C9orf3-202ENST00000297979 SLC2A12Q8TD20 617 aa13.17□□□□□ -0.3
C9orf3-202ENST00000297979 GNPDA2Q8TDQ7 276 aa13.17□□□□□ -0.3
C9orf3-202ENST00000297979 RNF31Q96EP0 1072 aa13.17□□□□□ -0.3
C9orf3-202ENST00000297979 SMOC1Q9H4F8 434 aa13.17□□□□□ -0.3
C9orf3-202ENST00000297979 C11orf16Q9NQ32 467 aa13.17□□□□□ -0.3
C9orf3-202ENST00000297979 CFL2Q9Y281 166 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms