RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 PSMG1O95456 288 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 PAX1P15863 534 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 IL11P20809 199 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 IMPDH1P20839 514 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 SHC1P29353 583 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 ZNF844Q08AG5 666 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 GANABQ14697 944 aaKnown RBP8.29□□□□□ -1.08
CNOT9-202ENST00000295701 DECR1Q16698 335 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 GLYR1Q49A26 553 aaPredicted RBP8.29□□□□□ -1.08
CNOT9-202ENST00000295701 SPIN4Q56A73 249 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 SPDYAQ5MJ70 313 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 ANKRD26P1Q6NSI1 321 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 C8orf74Q6P047 294 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 GALNT18Q6P9A2 607 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 ZNF551Q7Z340 670 aaPredicted RBP8.29□□□□□ -1.08
CNOT9-202ENST00000295701 ATG4DQ86TL0 474 aaPredicted RBP8.29□□□□□ -1.08
CNOT9-202ENST00000295701 SAMD14Q8IZD0 417 aaPredicted RBP8.29□□□□□ -1.08
CNOT9-202ENST00000295701 SPATA3Q8NHX4 192 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.29□□□□□ -1.086e-9■■■□□ 17.9
CNOT9-202ENST00000295701 TMEM171Q8WVE6 324 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 ROBO4Q8WZ75 1007 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 GFM2Q969S9 779 aaKnown RBP8.29□□□□□ -1.08
CNOT9-202ENST00000295701 DTNBP1Q96EV8 351 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 EGLN2Q96KS0 407 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 AMDHD1Q96NU7 426 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 LMF2Q9BU23 707 aaKnown RBP8.29□□□□□ -1.08
CNOT9-202ENST00000295701 TBL1XR1Q9BZK7 514 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 ACTR6Q9GZN1 396 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 STMN4Q9H169 189 aaPredicted RBP8.29□□□□□ -1.08
CNOT9-202ENST00000295701 RASSF4Q9H2L5 321 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 TMEM185BQ9H7F4 350 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 PTGES2Q9H7Z7 377 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 TNFRSF12AQ9NP84 129 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 FBXO34Q9NWN3 711 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 FAM120CQ9NX05 1096 aaKnown RBP8.29□□□□□ -1.08
CNOT9-202ENST00000295701 ABCG2Q9UNQ0 655 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 LAMP3Q9UQV4 416 aa8.29□□□□□ -1.08
CNOT9-202ENST00000295701 IGLV3-32A0A0A0MS00 114 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 GOLGA8RI6L899 631 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 NDUFS7O75251 213 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 CRLF1O75462 422 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 OXSR1O95747 527 aaPredicted RBP8.28□□□□□ -1.08
CNOT9-202ENST00000295701 PLGP00747 810 aaPredicted RBP8.28□□□□□ -1.08
CNOT9-202ENST00000295701 SOD3P08294 240 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 SNRPAP09012 282 aaKnown RBP8.28□□□□□ -1.08
CNOT9-202ENST00000295701 ATP5F1P24539 256 aaPredicted RBP8.28□□□□□ -1.08
CNOT9-202ENST00000295701 ECHS1P30084 290 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 CDKN1AP38936 164 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 PRKAA2P54646 552 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 CTBP2P56545 445 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 ETF1P62495 437 aaKnown RBP8.28□□□□□ -1.08
CNOT9-202ENST00000295701 PRR5P85299 388 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 ZNF763Q0D2J5 394 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 C17orf67Q0P5P2 114 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 CLEC12BQ2HXU8 276 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 NUFIP2Q7Z417 695 aaKnown RBP8.28□□□□□ -1.08
CNOT9-202ENST00000295701 RELL1Q8IUW5 271 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 ZNF619Q8N2I2 560 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 OR2L13Q8N349 312 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 ZNF611Q8N823 705 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 OR6K3Q8NGY3 331 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 OR4C3Q8NH37 302 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 FBXO30Q8TB52 745 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 POC1BQ8TC44 478 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 IFT81Q8WYA0 676 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 CAVIN3Q969G5 261 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 CIDECQ96AQ7 238 aaPredicted RBP8.28□□□□□ -1.08
CNOT9-202ENST00000295701 OTUB1Q96FW1 271 aaPredicted RBP8.28□□□□□ -1.08
CNOT9-202ENST00000295701 SH3YL1Q96HL8 342 aaPredicted RBP8.28□□□□□ -1.08
CNOT9-202ENST00000295701 GMPPAQ96IJ6 420 aaPredicted RBP8.28□□□□□ -1.08
CNOT9-202ENST00000295701 TMEM204Q9BSN7 226 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 GSTO2Q9H4Y5 243 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 Q9N2J8 555 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 MID1IP1Q9NPA3 183 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 DDX18Q9NVP1 670 aaKnown RBP8.28□□□□□ -1.08
CNOT9-202ENST00000295701 SIRT5Q9NXA8 310 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 ZNF180Q9UJW8 692 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 EMC9Q9Y3B6 208 aa8.28□□□□□ -1.08
CNOT9-202ENST00000295701 UQCRHLA0A096LP55 91 aa8.27□□□□□ -1.09
CNOT9-202ENST00000295701 OVOL3O00110 214 aa8.27□□□□□ -1.09
CNOT9-202ENST00000295701 EFNA2O43921 213 aa8.27□□□□□ -1.09
CNOT9-202ENST00000295701 SS18L1O75177 396 aaPredicted RBP8.27□□□□□ -1.09
CNOT9-202ENST00000295701 ACP2P11117 423 aa8.27□□□□□ -1.09
CNOT9-202ENST00000295701 TAC1P20366 129 aa8.27□□□□□ -1.09
CNOT9-202ENST00000295701 EFNA1P20827 205 aaPredicted RBP8.27□□□□□ -1.09
CNOT9-202ENST00000295701 PSMA4P25789 261 aaKnown RBP8.27□□□□□ -1.09
CNOT9-202ENST00000295701 ACVR1BP36896 505 aa8.27□□□□□ -1.09
CNOT9-202ENST00000295701 MAP3K8P41279 467 aa8.27□□□□□ -1.09
CNOT9-202ENST00000295701 CLK3P49761 638 aaKnown RBP8.27□□□□□ -1.09
CNOT9-202ENST00000295701 PRKAG1P54619 331 aa8.27□□□□□ -1.09
CNOT9-202ENST00000295701 PKNOX1P55347 436 aa8.27□□□□□ -1.09
CNOT9-202ENST00000295701 PSPHP78330 225 aa8.27□□□□□ -1.09
CNOT9-202ENST00000295701 SLC18A2Q05940 514 aa8.27□□□□□ -1.09
CNOT9-202ENST00000295701 HSPB3Q12988 150 aa8.27□□□□□ -1.09
CNOT9-202ENST00000295701 VEZF1Q14119 521 aa8.27□□□□□ -1.09
CNOT9-202ENST00000295701 FGFBP1Q14512 234 aa8.27□□□□□ -1.09
CNOT9-202ENST00000295701 PLPPR5Q32ZL2 321 aa8.27□□□□□ -1.09
CNOT9-202ENST00000295701 ZNF385BQ569K4 471 aa8.27□□□□□ -1.09
CNOT9-202ENST00000295701 TIFABQ6ZNK6 161 aa8.27□□□□□ -1.09
CNOT9-202ENST00000295701 Q6ZS46 218 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms