RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Mep1aP28825 747 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Irf7P70434 457 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Tex30Q3TUU5 225 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Wdr20Q3UWE6 569 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Zfp956Q3UZY6 572 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Fam98bQ80VD1 429 aaKnown RBP8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Psmd5Q8BJY1 504 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Rcc2Q8BK67 520 aaKnown RBP8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 AspaQ8R3P0 312 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gstm4Q8R5I6 218 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Tfap2dQ91ZK0 452 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Def8Q99J78 448 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Pla2g12bQ99P27 195 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gkn2Q9CQS6 184 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Ska2Q9CR46 120 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Atp5g1Q9CR84 136 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 NapgQ9CWZ7 312 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Yif1bQ9CX30 311 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Arhgap8Q9CXP4 425 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Mrpl30Q9D7N6 160 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Pnp2Q9D8C9 305 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 HcstQ9QUJ0 79 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Dctn3Q9Z0Y1 186 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Deaf1Q9Z1T5 566 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Kctd14A0A0U1RNG7 287 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Tmem182B2RVY9 229 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 ItpkbB2RXC2 942 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gm8677K9J7G9 307 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Vmn2r8L7N472 848 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Ascl5M0QWB7 188 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Prkag1O54950 330 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Clec2lP0C7M9 211 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Pou4f1P17208 421 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Ccnd1P25322 295 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Dynll1P63168 89 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Tmem211Q3UUA0 195 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 MlipQ5FW52 269 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Prl2c1Q5SVL9 228 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Snta1Q61234 503 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Slc6a5Q761V0 799 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Olfr1167Q7TR26 316 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Olfr23Q7TRX4 325 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Amigo1Q80ZD8 492 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Lrrc24Q8BHA1 521 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Coq3Q8BMS4 370 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Klhl12Q8BZM0 568 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Tmsb15lQ8C0W0 80 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Fbxl3Q8C4V4 428 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Ocel1Q8VCR9 219 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Zdhhc5Q8VDZ4 715 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Ubtd1Q91WB7 227 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Hemk1Q921L7 340 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 TpbpbQ9CQC0 121 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Rdm1Q9CQK3 281 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Agpat3Q9D517 376 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 GgctQ9D7X8 188 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Isoc2bQ9DCC7 210 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Sertad3Q9ERC3 197 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 PorcnQ9JJJ7 461 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Tdp2Q9JJX7 370 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Trp53inp1Q9QXE4 239 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 HgfacQ9R098 653 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 FaimQ9WUD8 179 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Ch25hQ9Z0F5 298 aa8.44□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Atp8b4A2ANX3 1194 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Skint9A7TZG3 319 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 MsmpB1AWI6 139 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gm20683H3BKJ1 410 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Vmn2r67K7N6T2 851 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gm8720K9J7F4 307 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Vmn2r61L7N2B8 865 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Pde6dO55057 150 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Stx7O70439 261 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Got2P05202 430 aaKnown RBP8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Igsf6P0C6B7 237 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 InmtP40936 264 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Plk2P53351 682 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Fv1P70213 459 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 CtrcQ3SYP2 268 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Itgb2lQ3UV74 738 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Olfr1418Q7TQS3 318 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Olfr169Q7TS53 313 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Q80Y73 168 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Cox15Q8BJ03 413 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 BB014433Q8C5R5 389 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Sla2Q8R4L0 259 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Olfr1417Q8VGJ6 315 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Pbp2Q8VIN1 187 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Trub2Q91WG3 331 aaKnown RBP8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Ms4a4dQ99N05 225 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Nudt7Q99P30 236 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Kdelr2Q9CQM2 212 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Mfap4Q9D1H9 257 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 FastkQ9JIX9 511 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Ankrd2Q9WV06 328 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Dicer1Q8R418 1916 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Adgra2Q91ZV8 1336 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Ralgps1A2AR50 585 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gm572B1ARY8 399 aa8.43□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Vmn1r129E9QA94 307 aa8.43□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms