RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Chmp1b2Q9CQD4 199 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Zdhhc13Q9CWU2 622 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Erv3Q9DAX3 200 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Olfr930Q9EQ99 308 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Tmem44E9Q4M0 433 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Csnk2a2O54833 350 aaKnown RBP6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Phxr1P15973 60 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Tnfrsf1bP25119 474 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 LdlrP35951 862 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Igfbp1P47876 272 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Pcbp4P57724 403 aaKnown RBP6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Lrrn4clQ3TYX2 239 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Nrsn2Q5HZK2 202 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Olfr325Q5NCD2 326 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Il18r1Q61098 537 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Lasp1Q61792 263 aaKnown RBP6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Rmnd5aQ80YQ8 391 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Baiap2Q8BKX1 535 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Slc26a9Q8BU91 790 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Olfr77Q8VEY9 312 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Nphs2Q91X05 385 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gkn2Q9CQS6 184 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Fam32aQ9CR80 112 aaKnown RBP6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Moxd1Q9CXI3 613 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Hspb11Q9D6H2 143 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Sacm1lQ9EP69 587 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 ClpxQ9JHS4 634 aaKnown RBP6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gm4131A0A140LJ24 318 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Slc43a3A2AVZ9 502 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 UprtB1AVZ0 310 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Zar1lC3VD30 291 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Vsig10lD3YZF7 868 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Vmn1r177E9PXM3 309 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Serpinb9cI7HJI5 387 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Vmn1r20K7N778 303 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Stk16O88697 305 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Mc3rP33033 323 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Atp5a1Q03265 553 aaKnown RBP6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 B4galnt2Q09199 510 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Usp39Q3TIX9 564 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Adam9Q61072 845 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Dpp10Q6NXK7 797 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Olfr857Q7TRF7 309 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Spag1Q80ZX8 901 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gper1Q8BMP4 375 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 DpcdQ8BPA8 203 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Irak2Q8CFA1 622 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Slc25a45Q8CFJ7 288 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Tfb1mQ8JZM0 345 aaKnown RBP6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Serpinb1bQ8VHP7 382 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Ranbp3Q9CT10 491 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 CenpnQ9CZW2 337 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Lsm12Q9D0R8 195 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Hmgn3Q9DCB1 99 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Vmn1r52Q9EP79 309 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Smok1Q9QYZ4 484 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Mad2l1Q9Z1B5 205 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Igkv6-25A0A140T8N7 115 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Zfp945E9PYM8 794 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Vmn2r105E9Q3A5 860 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Fbxw9F8VPX2 458 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Irs3O54718 495 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Wipf3P0C7L0 485 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Il1r1P13504 576 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 IapP24822 559 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Stfa2P35174 103 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Ufm1P61961 85 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gfi1P70338 423 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 S100gP97816 79 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Orm1Q60590 207 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 OgnQ62000 298 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 ToxQ66JW3 526 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Coq4Q8BGB8 266 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Acp7Q8BX37 438 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Tab1Q8CF89 502 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Abhd11Q8K4F5 307 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Tmcc3Q8R310 477 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Lsm1Q8VC85 133 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Fitm1Q91V79 292 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Acsl6Q91WC3 697 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Olfr103Q920Y8 313 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Scd3Q99PL7 359 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Fbxl20Q9CZV8 436 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Nudt14Q9D142 222 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Aaed1Q9D1A0 226 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Cir1Q9DA19 450 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Uqcrc2Q9DB77 453 aaKnown RBP6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Serinc3Q9QZI9 472 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Sae1Q9R1T2 350 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 ArntlQ9WTL8 632 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gm21865A0A087WRL2 222 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Cd300ld2A2A7W0 305 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Rdh8D3Z6W3 317 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Hcn1O88704 910 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Dpy19l2P0CW70 773 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Cd63P41731 238 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Eif2dQ61211 570 aaKnown RBP6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Snx6Q6P8X1 406 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Olig3Q6PFG8 273 aa6.44□□□□□ -1.38
Bdnf-201ENSMUST00000053317 D3Ertd751eQ8BGN2 192 aa6.44□□□□□ -1.38
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms