RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Prkd2Q8BZ03 875 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Kcnc4Q8R1C0 628 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Glo1Q9CPU0 184 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 PlpbpQ9Z2Y8 274 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Myh13B1AR69 1938 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Mettl8A2AUU0 281 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Fli1P26323 452 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Cyb5aP56395 134 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Zdhhc2P59267 366 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Kcnk2P97438 426 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Gfod1Q3UHD2 390 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Sdc3Q64519 442 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Zfp429Q7M6Y0 485 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Ppp1r15bQ8BFW3 697 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Sumf2Q8BPG6 308 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Leng9Q8BTN6 485 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Bpifb2Q8C1E1 462 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 McatQ8R3F5 381 aaKnown RBP9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Thap7Q8VCZ3 309 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 SharpinQ91WA6 380 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 VasnQ9CZT5 673 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Rrp8Q9DB85 457 aaKnown RBP9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 4932443I19RikA0A286YE38 169 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Zfp937A2ANU7 503 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Hbb-bh2B2RVB7 147 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Ldb2O55203 373 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 UbdP63072 162 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Cdh24Q6PFX6 781 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr744Q7TRM0 323 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 ItpkcQ7TS72 678 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Clec18aQ7TSQ1 534 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 CblcQ80XL1 496 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Zfand1Q8BFR6 268 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 1700020N01RikQ8CF20 87 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Vmn1r188Q8K3N2 308 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr525Q8VGL5 309 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Trappc2Q9CQP2 140 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Adad2Q9D5P4 478 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 ArntlQ9WTL8 632 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Skint7A7XV04 395 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr294F7CWV4 335 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 P03987 398 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 S100a15aQ6S5I3 108 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Sec14l4Q8R0F9 403 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 NotumQ8R116 503 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Vmn1r185Q8R299 319 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr666Q8VH00 318 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Itfg2Q91WI7 443 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Naalad2Q9CZR2 740 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Armc10Q9D0L7 306 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Isoc2bQ9DCC7 210 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr631F8VPJ9 319 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Cldn34aG3UW52 211 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Vmn2r92L7N2A4 860 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Tbpl1P62340 186 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Gm5416Q6IE28 97 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Scml4Q80VG1 408 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Amigo3Q8C2S7 508 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 EloaQ8CB77 773 aaKnown RBP9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Tmigd1Q9D7L8 261 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 PolmQ9JIW4 496 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Gdf2Q9WV56 428 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Cd320Q9Z1P5 260 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Zfp605E9QAH2 694 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 IlkO55222 452 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Enpp1P06802 906 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 H2-Q7P14429 334 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 H2-Q9P14431 200 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 RpiaP47968 303 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Cpne2P59108 548 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 SypQ62277 314 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Hs6st2Q80UW0 612 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 ToporsQ80Z37 1033 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Poldip3Q8BG81 420 aaKnown RBP9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Ap5m1Q8BJ63 490 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Dcun1d4Q8CCA0 292 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Kctd11Q8K485 232 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Vmn1r33Q8R2E0 305 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 AassQ99K67 926 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Raver1Q9CW46 748 aaKnown RBP9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr705Q9EPF7 316 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Ralgps2Q9ERD6 590 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Pm20d2A3KG59 431 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Vmn2r115E9Q0E7 857 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Gm5458L7N219 204 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Cd8aP01731 247 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Mmp11Q02853 492 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Sec24aQ3U2P1 1090 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 H2-M10.2Q85ZW9 329 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Clvs2Q8BG92 327 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Abhd18Q8C1A9 464 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Fam78aQ8C552 283 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 0610009B22RikQ8R3W2 140 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Rnf144aQ925F3 292 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Dnttip1Q99LB0 328 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Tcam1Q99NB3 548 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Cytl1A1E5L0 139 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 TmppeD3Z286 447 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Vmn2r8L7N472 848 aa9.61□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Klk1b16P04071 261 aa9.61□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms