RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 PTPN18Q99952 460 aa14.33□□□□□ -0.11
UBE3A-227ENST00000638011 GAR1Q9NY12 217 aaKnown RBP14.33□□□□□ -0.11
UBE3A-227ENST00000638011 SCML1Q9UN30 329 aa14.33□□□□□ -0.11
UBE3A-227ENST00000638011 TRAV18A0A075B6X5 111 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 TTC24A2A3L6 582 aaPredicted RBP14.33□□□□□ -0.12
UBE3A-227ENST00000638011 RTCAO00442 366 aaKnown RBP14.33□□□□□ -0.12
UBE3A-227ENST00000638011 NDUFV1P49821 464 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 STK11Q15831 433 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 OR10Z1Q8NGY1 313 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 OR4K15Q8NH41 348 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 SYNPRQ8TBG9 265 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 PHYHIPQ92561 330 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 MIB2Q96AX9 1013 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 MMP28Q9H239 520 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 PRR36Q9H6K5 1346 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 CNOT4O95628 575 aaKnown RBP14.33□□□□□ -0.12
UBE3A-227ENST00000638011 CSTAP01040 98 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 BRCC3P46736 316 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 TCEAL1Q15170 157 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 SIRPB2Q5JXA9 342 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 OR13C2Q8NGS9 318 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 SLC16A10Q8TF71 515 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 GGHQ92820 318 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 CHRDL1Q9BU40 450 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 SLC25A32Q9H2D1 315 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 A6NIZ1 184 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 KNG1P01042 644 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 EFNA1P20827 205 aaPredicted RBP14.33□□□□□ -0.12
UBE3A-227ENST00000638011 RAP1BP61224 184 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 RAP1AP62834 184 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 RBM39Q14498 530 aaKnown RBP14.33□□□□□ -0.12
UBE3A-227ENST00000638011 CD276Q5ZPR3 534 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 STEAP4Q687X5 459 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 OR52E8Q6IFG1 317 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 MAMDC2Q7Z304 686 aaPredicted RBP14.33□□□□□ -0.12
UBE3A-227ENST00000638011 PCDHGA6Q9Y5G7 932 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 NID2Q14112 1375 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 IFT172Q9UG01 1749 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 EPHX1P07099 455 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 MMP2P08253 660 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 ACY1Q03154 408 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 DEFB128Q7Z7B8 93 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 GLB1L2Q8IW92 636 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 GAB3Q8WWW8 586 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 FEVQ99581 238 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 HMX1Q9NP08 348 aaPredicted RBP14.33□□□□□ -0.12
UBE3A-227ENST00000638011 VAPAQ9P0L0 249 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 REV1Q9UBZ9 1251 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 PURGQ9UJV8 347 aaKnown RBP14.33□□□□□ -0.12
UBE3A-227ENST00000638011 SMIM30A4D0T7 59 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 KLK3P07288 261 aaPredicted RBP14.33□□□□□ -0.12
UBE3A-227ENST00000638011 DTYMKP23919 212 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 SP2Q02086 613 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 PMEPA1Q969W9 287 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 hCG_1807616A0A1W2PRN6 198 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 SYT7O43581 403 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 UBL3O95164 117 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 CKMT1AP12532 417 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 CNN3Q15417 329 aaKnown RBP14.33□□□□□ -0.12
UBE3A-227ENST00000638011 PAGE3Q5JUK9 113 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 SFRP4Q6FHJ7 346 aaPredicted RBP14.33□□□□□ -0.12
UBE3A-227ENST00000638011 LRFN4Q6PJG9 635 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 LRRC25Q8N386 305 aaPredicted RBP14.33□□□□□ -0.12
UBE3A-227ENST00000638011 TECTBQ96PL2 329 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 MYO16Q9Y6X6 1858 aa14.33□□□□□ -0.12
UBE3A-227ENST00000638011 MYOM1P52179 1685 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 DIP2BQ9P265 1576 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 CDKN1CP49918 316 aaPredicted RBP14.32□□□□□ -0.12
UBE3A-227ENST00000638011 VEZF1Q14119 521 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 ZNF561Q8N587 486 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 A0A1W2PQ09 198 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 UGDHO60701 494 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 SORDQ00796 357 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 TMEM156Q8N614 296 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 SPRYD4Q8WW59 207 aaPredicted RBP14.32□□□□□ -0.12
UBE3A-227ENST00000638011 MRPS17Q9Y2R5 130 aaKnown RBP14.32□□□□□ -0.12
UBE3A-227ENST00000638011 ALPK2Q86TB3 2170 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 JUNDP17535 347 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 CLDN8P56748 225 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 UQCC3Q6UW78 93 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 CERS5Q8N5B7 392 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 IL17RCQ8NAC3 791 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 GLIS3Q8NEA6 775 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 SEMA4CQ9C0C4 833 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 PIK3C2BO00750 1634 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 WASH4PA8MWX3 477 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 GNSP15586 552 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 DAP3P51398 398 aaKnown RBP14.32□□□□□ -0.12
UBE3A-227ENST00000638011 MANEALQ5VSG8 457 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 MSRAQ9UJ68 235 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 CACNA1BQ00975 2339 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 BDKRB1P46663 353 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 BTG1P62324 171 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 YIPF5Q969M3 257 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 ACSS2Q9NR19 701 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 POLHQ9Y253 713 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 UBR2Q8IWV8 1755 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 MRPS34P82930 218 aaKnown RBP14.32□□□□□ -0.12
UBE3A-227ENST00000638011 SBSNQ6UWP8 590 aa14.32□□□□□ -0.12
UBE3A-227ENST00000638011 ANKK1Q8NFD2 765 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms