RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 BTBD16Q32M84 506 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 AGBL4Q5VU57 503 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 CDC73Q6P1J9 531 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 SLC48A1Q6P1K1 146 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 WDR88Q6ZMY6 472 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 ZNF765Q7L2R6 523 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 PRSS41Q7RTY9 318 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 ARL14Q8N4G2 192 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 AP3S1Q92572 193 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 ZFP3Q96NJ6 502 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 CBLCQ9ULV8 474 aa13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 ARHGEF17Q96PE2 2063 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-228ENST00000636610 TBC1D3DA0A087WVF3 549 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 TBC1D3IA0A087WXS9 549 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 TBC1D3EA0A087X179 549 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 TBC1D3KA0A087X1G2 549 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 CXorf51AA0A1B0GTR3 108 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 TMEM129A0AVI4 362 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 TBC1D3FA6NER0 549 aaPredicted RBP13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 TBC1D3LB9A6J9 549 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 PSMD9O00233 223 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 MEN1O00255 615 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 YES1P07947 543 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 TBC1D3HP0C7X1 549 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 AGFG1P52594 562 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 SRP54P61011 504 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 RPA4Q13156 261 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 ARHGAP19Q14CB8 494 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 EXOSC7Q15024 291 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 CST6Q15828 149 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 DUSP5Q16690 384 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 NDUFA5Q16718 116 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 NDUFA9Q16795 377 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 PGGHGQ32M88 737 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 PUS10Q3MIT2 529 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 TMEM52BQ4KMG9 183 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 CCDC58Q4VC31 144 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 TBC1D3GQ6DHY5 549 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 VASNQ6EMK4 673 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 TBC1D3CQ6IPX1 549 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 ZNF761Q86XN6 746 aaPredicted RBP13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 IZUMO1Q8IYV9 350 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 TBC1D3Q8IZP1 549 aaPredicted RBP13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 RDH10Q8IZV5 341 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 OR2L5Q8NG80 312 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 BADQ92934 168 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 DNAJA3Q96EY1 480 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 PCBD2Q9H0N5 130 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 UBQLN3Q9H347 655 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 CD93Q9NPY3 652 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 ZNF624Q9P2J8 865 aaPredicted RBP13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 SLC27A6Q9Y2P4 619 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 RGS13O14921 159 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 AKAP8O43823 692 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 KAT7O95251 611 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 NFATC1O95644 943 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 HLA-DPB1P04440 258 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 PVRP15151 417 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 ALAS2P22557 587 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 IFNA8P32881 189 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 EVX1P49640 407 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 GALK2Q01415 458 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 ARHGEF6Q15052 776 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 GXYLT1Q4G148 440 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 BCL2L15Q5TBC7 163 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 KIAA1211LQ6NV74 962 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 BHLHB9Q6PI77 547 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 ADAMTSL4Q6UY14 1074 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 THSD4Q6ZMP0 1018 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 BMPERQ8N8U9 685 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 BEST4Q8NFU0 473 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 OR13C2Q8NGS9 318 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 LCN9Q8WX39 176 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 RNF170Q96K19 258 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 MKRN2Q9H000 416 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 IRF2BPLQ9H1B7 796 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 OR52D1Q9H346 318 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 PPP1R3EQ9H7J1 279 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 EXOSC1Q9Y3B2 195 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 MAU2Q9Y6X3 613 aa13.08□□□□□ -0.32
CACNA1A-228ENST00000636610 A0A1W2PQU0 124 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 A0A1W2PRG6 482 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 DAPL1A0PJW8 107 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 OR2W5A6NFC9 320 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 PROM1O43490 865 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 PRKAR1AP10644 381 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 ERGP11308 486 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 PRKCAP17252 672 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 MAKP20794 623 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 IFNGR2P38484 337 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 DSG2Q14126 1118 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 NNATQ16517 81 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 AADACL4Q5VUY2 407 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 RFLNBQ8N5W9 214 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 OR2T33Q8NG76 320 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 OR5T3Q8NGG3 340 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 HCAR2Q8TDS4 363 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 SNAPC3Q92966 411 aa13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 TSACCQ96A04 125 aaPredicted RBP13.07□□□□□ -0.32
CACNA1A-228ENST00000636610 ALG8Q9BVK2 526 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms