RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 NKX6-3A6NJ46 265 aa15.18■□□□□ 0.02
CLN5-208ENST00000636183 SLC43A1O75387 559 aa15.18■□□□□ 0.02
CLN5-208ENST00000636183 HTR5AP47898 357 aa15.18■□□□□ 0.02
CLN5-208ENST00000636183 MANEALQ5VSG8 457 aa15.18■□□□□ 0.02
CLN5-208ENST00000636183 ADIPOR2Q86V24 386 aa15.18■□□□□ 0.02
CLN5-208ENST00000636183 SYT3Q9BQG1 590 aa15.18■□□□□ 0.02
CLN5-208ENST00000636183 MED18Q9BUE0 208 aa15.18■□□□□ 0.02
CLN5-208ENST00000636183 KIAA1210Q9ULL0 1709 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 SNAPC5O75971 98 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 F2RP25116 425 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 RPA4Q13156 261 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 C6orf136Q5SQH8 315 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 PEX13Q92968 403 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 TSPAN10Q9H1Z9 355 aaPredicted RBP15.17■□□□□ 0.02
CLN5-208ENST00000636183 DCDC2BA2VCK2 349 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 CEBPZOSA8MTT3 80 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 SERPINE2P07093 398 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 TM4SF4P48230 202 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 OR1D5P58170 312 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 ZNF616Q08AN1 781 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 TMEM176BQ3YBM2 270 aaPredicted RBP15.17■□□□□ 0.02
CLN5-208ENST00000636183 TMEM173Q86WV6 379 aaPredicted RBP15.17■□□□□ 0.02
CLN5-208ENST00000636183 UMODL1-AS1Q8N2C9 162 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 DMBX1Q8NFW5 382 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 TANKQ92844 425 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 SLC2A13Q96QE2 648 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 EPHX3Q9H6B9 360 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 SLC6A14Q9UN76 642 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 SLC22A31A6NKX4 558 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 FOXE1O00358 373 aaPredicted RBP15.17■□□□□ 0.02
CLN5-208ENST00000636183 SLC1A3P43003 542 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 MSS51Q4VC12 460 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 ZNF431Q8TF32 576 aaPredicted RBP15.17■□□□□ 0.02
CLN5-208ENST00000636183 MAFIPQ8WZ33 124 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 SCRN2Q96FV2 425 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 TRIB3Q96RU7 358 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 SUCNR1Q9BXA5 334 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 UBE2ZQ9H832 354 aaPredicted RBP15.17■□□□□ 0.02
CLN5-208ENST00000636183 LSM5Q9Y4Y9 91 aaKnown RBP15.17■□□□□ 0.02
CLN5-208ENST00000636183 KLRC4-KLRK1H3BQV0 150 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 ATP6V1G1O75348 118 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 NFYBP25208 207 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 BMXP51813 675 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 BORAQ6PGQ7 559 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 CCDC71LQ8N9Z2 235 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 IFI44Q8TCB0 444 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 TMEM19Q96HH6 336 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 SLC19A3Q9BZV2 496 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 TMEM9BQ9NQ34 198 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 THSD1Q9NS62 852 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 SLC22A1O15245 554 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 RGS9O75916 674 aaPredicted RBP15.17■□□□□ 0.02
CLN5-208ENST00000636183 LDLRAD1Q5T700 205 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 CRELD2Q6UXH1 353 aaPredicted RBP15.17■□□□□ 0.02
CLN5-208ENST00000636183 MAL2Q969L2 176 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 SDHAF2Q9NX18 166 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 PPLO60437 1756 aa15.17■□□□□ 0.02
CLN5-208ENST00000636183 SERPINA7P05543 415 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 LCN1P31025 176 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 LUMP51884 338 aaPredicted RBP15.16■□□□□ 0.02
CLN5-208ENST00000636183 ARHGAP19Q14CB8 494 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 CDS1Q92903 461 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 TAAR8Q969N4 342 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 PINK1Q9BXM7 581 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 LIN28AQ9H9Z2 209 aaKnown RBP15.16■□□□□ 0.02
CLN5-208ENST00000636183 TNFSF15O95150 251 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 FADDQ13158 208 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 CNN3Q15417 329 aaKnown RBP15.16■□□□□ 0.02
CLN5-208ENST00000636183 TRAM1Q15629 374 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 COMMD6Q7Z4G1 85 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 SMAD6O43541 496 aaKnown RBP15.16■□□□□ 0.02
CLN5-208ENST00000636183 CD79BP40259 229 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 SAMD8Q96LT4 415 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 IER2Q9BTL4 223 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 RNF6Q9Y252 685 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 ANKRD33BA6NCL7 494 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 D6RAR5 112 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 HOXA9P31269 272 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 CLDN17P56750 224 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 PTPRRQ15256 657 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 HES5Q5TA89 166 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 SLC22A25Q6T423 547 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 XKR5Q6UX68 686 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 PDZD3Q86UT5 571 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 AMIGO3Q86WK7 504 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 SLC35F2Q8IXU6 374 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 MKXQ8IYA7 352 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 ITFG2Q969R8 447 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 C12orf43Q96C57 262 aaKnown RBP15.16■□□□□ 0.02
CLN5-208ENST00000636183 TMEM59Q9BXS4 323 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 TRAPPC13A5PLN9 417 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 SLC19A2O60779 497 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 TNFRSF1BP20333 461 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 TSSK4Q6SA08 328 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 MEX3DQ86XN8 651 aaKnown RBP15.16■□□□□ 0.02
CLN5-208ENST00000636183 TP53INP2Q8IXH6 220 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 CDCP1Q9H5V8 836 aa15.16■□□□□ 0.02
CLN5-208ENST00000636183 TESQ9UGI8 421 aaKnown RBP15.16■□□□□ 0.02
CLN5-208ENST00000636183 URB1O60287 2271 aaKnown RBP15.16■□□□□ 0.02
CLN5-208ENST00000636183 OR5H15A6NDH6 313 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms