RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 NNATQ16517 81 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 MAPK14Q16539 360 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 MICAQ29983 383 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 EXOC3L2Q2M3D2 409 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 DCST1Q5T197 706 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 PDZK1Q5T2W1 519 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 MRPL2Q5T653 305 aaKnown RBP6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 TTC23Q5W5X9 447 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 KDM4DQ6B0I6 523 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 FAHD1Q6P587 224 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 FAM199XQ6PEV8 388 aaPredicted RBP6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 PLEKHM3Q6ZWE6 761 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 ZNF550Q7Z398 422 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 HMGN2P46Q86SG4 172 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 ZAR1Q86SH2 424 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 SLCO6A1Q86UG4 719 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 COMTD1Q86VU5 262 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 TMPRSS12Q86WS5 348 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 RBM45Q8IUH3 476 aaKnown RBP6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 GRAMD2AQ8IUY3 354 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 ZNF440Q8IYI8 595 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 OFCC1Q8IZS5 231 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 HS3ST5Q8IZT8 346 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 SLC34A3Q8N130 599 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 CLIP4Q8N3C7 705 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 MARVELD2Q8N4S9 558 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 ZNF441Q8N8Z8 693 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 ATG16L2Q8NAA4 619 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 ZSCAN1Q8NBB4 408 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 APCDD1LQ8NCL9 501 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 ZNF555Q8NEP9 628 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 TOR1AIP2Q8NFQ8 470 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 OR10G2Q8NGC3 310 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 OR4D11Q8NGI4 311 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 OR52J3Q8NH60 311 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 CYGBQ8WWM9 190 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 TFAP2CQ92754 450 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 DIO2Q92813 273 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 ALPK1Q96QP1 1244 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 ADI1Q9BV57 179 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 ANKRD60Q9BZ19 345 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 SPRY4Q9C004 299 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 ZNF700Q9H0M5 742 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 ANKRD19PQ9H560 264 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 AKIRIN1Q9H9L7 192 aaPredicted RBP6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 ZNF556Q9HAH1 456 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 SMURF2Q9HAU4 748 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 UBQLN4Q9NRR5 601 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 TESQ9UGI8 421 aaKnown RBP6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 ENOPH1Q9UHY7 261 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 A4GNTQ9UNA3 340 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 SLC35A3Q9Y2D2 325 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 MAGED1Q9Y5V3 778 aaPredicted RBP6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 CACNA1BQ00975 2339 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 CROCCQ5TZA2 2017 aa6.96□□□□□ -1.3
PTP4A1-206ENST00000627002 DMDP11532 3685 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 EP300Q09472 2414 aaPredicted RBP6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 NPIPA5A0A0B4J1W7 369 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 IGHV3-20A0A0C4DH32 117 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 TRBV11-1A0A0K0K1C0 115 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 CENPVL1A0A0U1RR11 272 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 TEX51A0A1B0GUA7 166 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 A0A1W2PQ72 361 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 SERINC4A6NH21 518 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 C21orf140B9A014 251 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 NPIPA7E9PJI5 369 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 H3BNH8 94 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 SCDO00767 359 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 DLGAP1O14490 977 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 UGT2B11O75310 529 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 REM1O75628 298 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 KLF7O75840 302 aaPredicted RBP6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 ZFAND5O76080 213 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 SEC24DO94855 1032 aaPredicted RBP6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 UTS2O95399 124 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 SNAP29O95721 258 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 CSTAP01040 98 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 UMODP07911 640 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 NGFRP08138 427 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 RPSAP08865 295 aaKnown RBP6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 NPIPA8P0DM63 369 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 ITGAMP11215 1152 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 CEACAM1P13688 526 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 HPGDP15428 266 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 TCN2P20062 427 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 ENDOUP21128 410 aaKnown RBP6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 TBXA2RP21731 343 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 MYF6P23409 242 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 MMP11P24347 488 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 ELAVL4P26378 380 aaKnown RBP6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 IFNGR2P38484 337 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 DAPP51397 102 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 RPS6KA3P51812 740 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 NR0B1P51843 470 aaKnown RBP6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 PNLIPRP2P54317 469 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 CLDN6P56747 220 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 FOXL2P58012 376 aa6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 RPS15P62841 145 aaKnown RBP6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 ADARB1P78563 741 aaKnown RBP6.95□□□□□ -1.3
PTP4A1-206ENST00000627002 PLCXD2Q0VAA5 305 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms