RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 MMP26Q9NRE1 261 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 COL1A2P08123 1366 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 DIDO1Q9BTC0 2240 aaKnown RBP4.69□□□□□ -1.66
VPS13D-213ENST00000613099 HMSDA8MTL9 139 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 DIRAS3O95661 229 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 HOXD4P09016 255 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-213ENST00000613099 IMPA1P29218 277 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 ACSM1Q08AH1 577 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 LTB4RQ15722 352 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 RASGEF1AQ8N9B8 481 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 TMEM125Q96AQ2 219 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 LINC00052Q96N35 136 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 MXRA8Q9BRK3 442 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 KCTD3Q9Y597 815 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 MT-ND4P03905 459 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 PBLDP30039 288 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-213ENST00000613099 LIPAP38571 399 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 EVX1P49640 407 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 OR5I1Q13606 314 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 MFSD13AQ14CX5 517 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 CES5AQ6NT32 575 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 SPICQ8N5J4 248 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 ZMIZ2Q8NF64 920 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 PXYLP1Q8TE99 480 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 CABLES2Q9BTV7 478 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 ZDBF2Q9HCK1 2354 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 TRBC2A0A5B9 178 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 ADAMTS3O15072 1205 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 AK1P00568 194 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 RAB28P51157 221 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 OR4D2P58180 307 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 SIX1Q15475 284 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-213ENST00000613099 TGIF2LXQ8IUE1 241 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 RNF149Q8NC42 400 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 GLIS3Q8NEA6 775 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 DYRK2Q92630 601 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 NELFAQ9H3P2 528 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 BTG4Q9NY30 223 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 SLCO3A1Q9UIG8 710 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 PCDHB9Q9Y5E1 797 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 NME4O00746 187 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 IGHEP01854 428 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 HSF1Q00613 529 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 GLRX5Q86SX6 157 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 FAM71CQ8NEG0 241 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 CYP2W1Q8TAV3 490 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 MS4A3Q96HJ5 214 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 INTS14Q96SY0 518 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 FAM120CQ9NX05 1096 aaKnown RBP4.69□□□□□ -1.66
VPS13D-213ENST00000613099 MYOTQ9UBF9 498 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 RASD1Q9Y272 281 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 A0A1B0GV90 55 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 THP07101 528 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 AKAIN1P0CW23 69 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 CLCN3P51790 818 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 XKR4Q5GH76 650 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 TDRD10Q5VZ19 366 aaKnown RBP4.69□□□□□ -1.66
VPS13D-213ENST00000613099 ZPBP2Q6X784 338 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 ZFAND4Q86XD8 727 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 GNPDA2Q8TDQ7 276 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 APOLD1Q96LR9 279 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 CYP2S1Q96SQ9 504 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF382Q96SR6 550 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 SLC30A3Q99726 388 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 QTRT2Q9H974 415 aaKnown RBP4.69□□□□□ -1.66
VPS13D-213ENST00000613099 IL26Q9NPH9 171 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 PLCXD1Q9NUJ7 323 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 AQP7O14520 342 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 RAB40ALP0C0E4 278 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 FABP4P15090 132 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 EFNA1P20827 205 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-213ENST00000613099 ST8SIA6P61647 398 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 GRINAQ7Z429 371 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 SLC5A8Q8N695 610 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 RAB40AQ8WXH6 277 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 MARVELD1Q9BSK0 173 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 GPRC5CQ9NQ84 441 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 DUS2Q9NX74 493 aaKnown RBP4.69□□□□□ -1.66
VPS13D-213ENST00000613099 KIAA1522Q9P206 1035 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-213ENST00000613099 IL17BQ9UHF5 180 aa4.69□□□□□ -1.66
VPS13D-213ENST00000613099 PLSCR5A0PG75 271 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 SLC33A1O00400 549 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-213ENST00000613099 SIGLEC5O15389 551 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 HLA-HP01893 362 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 PTGFRP43088 359 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 POLR2LP62875 67 aaKnown RBP4.68□□□□□ -1.66
VPS13D-213ENST00000613099 MGAT3Q09327 533 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 CDHR3Q6ZTQ4 885 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 ZFPM1Q8IX07 1006 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 SORCS2Q96PQ0 1159 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 NPFFR2Q9Y5X5 522 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 PAPPAQ13219 1627 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 EDNRAP25101 427 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 GABRR2P28476 465 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 MTNR1AP48039 350 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 GINS1Q14691 196 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 HLXQ14774 488 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-213ENST00000613099 EIPR1Q53HC9 387 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 ACOT1Q86TX2 421 aa4.68□□□□□ -1.66
VPS13D-213ENST00000613099 C4orf19Q8IY42 314 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms