RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 DEF8Q6ZN54 512 aa9.05□□□□□ -0.96
SSX3-204ENST00000612497 RNF214Q8ND24 703 aa9.05□□□□□ -0.96
SSX3-204ENST00000612497 OR52N5Q8NH56 324 aa9.05□□□□□ -0.96
SSX3-204ENST00000612497 MAGOHBQ96A72 148 aaKnown RBP9.05□□□□□ -0.96
SSX3-204ENST00000612497 MTBPQ96DY7 904 aa9.05□□□□□ -0.96
SSX3-204ENST00000612497 FBXO17Q96EF6 278 aa9.05□□□□□ -0.96
SSX3-204ENST00000612497 SERPINI1Q99574 410 aa9.05□□□□□ -0.96
SSX3-204ENST00000612497 VRK1Q99986 396 aaPredicted RBP9.05□□□□□ -0.96
SSX3-204ENST00000612497 CAB39LQ9H9S4 337 aa9.05□□□□□ -0.96
SSX3-204ENST00000612497 MYNNQ9NPC7 610 aa9.05□□□□□ -0.96
SSX3-204ENST00000612497 PFDN4Q9NQP4 134 aa9.05□□□□□ -0.96
SSX3-204ENST00000612497 FAM120CQ9NX05 1096 aaKnown RBP9.05□□□□□ -0.96
SSX3-204ENST00000612497 PRSS50Q9UI38 385 aa9.05□□□□□ -0.96
SSX3-204ENST00000612497 OR5H1A6NKK0 313 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 SUPT3HB4E1H0 165 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 FOXE1O00358 373 aaPredicted RBP9.04□□□□□ -0.96
SSX3-204ENST00000612497 PHGDHO43175 533 aaKnown RBP9.04□□□□□ -0.96
SSX3-204ENST00000612497 SUPT3HO75486 399 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 PRKD3O94806 890 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 SEMA3DO95025 777 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 YES1P07947 543 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 IGHV1-2P23083 117 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 APOBEC3AP31941 199 aaPredicted RBP9.04□□□□□ -0.96
SSX3-204ENST00000612497 SFTPDP35247 375 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 LIMS1P48059 325 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 PIK3CGP48736 1102 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 DVL1P1P54792 670 aaPredicted RBP9.04□□□□□ -0.96
SSX3-204ENST00000612497 CDH15P55291 814 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 HILS1P60008 231 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 MGAT5Q09328 741 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 CSTF3Q12996 717 aaKnown RBP9.04□□□□□ -0.96
SSX3-204ENST00000612497 ZNF628Q5EBL2 1059 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 RNASEH2BQ5TBB1 312 aaKnown RBP9.04□□□□□ -0.96
SSX3-204ENST00000612497 SHQ1Q6PI26 577 aaKnown RBP9.04□□□□□ -0.96
SSX3-204ENST00000612497 PAGE2Q7Z2X7 111 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 CCDC116Q8IYX3 515 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 GTPBP8Q8N3Z3 284 aaPredicted RBP9.04□□□□□ -0.96
SSX3-204ENST00000612497 ANKS4BQ8N8V4 417 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 FAM110BQ8TC76 370 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 SLC9A6Q92581 669 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 HPS1Q92902 700 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 MRPL24Q96A35 216 aaKnown RBP9.04□□□□□ -0.96
SSX3-204ENST00000612497 CNRIP1Q96F85 164 aaPredicted RBP9.04□□□□□ -0.96
SSX3-204ENST00000612497 RNF145Q96MT1 663 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 SNX18Q96RF0 628 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 JMJD8Q96S16 334 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 NPAS1Q99742 590 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 C1QTNF6Q9BXI9 259 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 TBL1XR1Q9BZK7 514 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 TSPY26PQ9H489 355 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 GP6Q9HCN6 339 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 TIGARQ9NQ88 270 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 AHSPQ9NZD4 102 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 NUDT4Q9NZJ9 180 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 GUCA1BQ9UMX6 200 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 CHMP2BQ9UQN3 213 aa9.04□□□□□ -0.96
SSX3-204ENST00000612497 A0A087WZY1 265 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 A0A1W2PR80 420 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 SNUPNO95149 360 aaKnown RBP9.03□□□□□ -0.96
SSX3-204ENST00000612497 WISP3O95389 354 aaPredicted RBP9.03□□□□□ -0.96
SSX3-204ENST00000612497 PGM3O95394 542 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 ANGPTL1O95841 491 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 CXCR5P32302 372 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 ELK3P41970 407 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 OR3A2P47893 321 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 RFX3P48380 749 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 SNRPD2P62316 118 aaKnown RBP9.03□□□□□ -0.96
SSX3-204ENST00000612497 PHC1P78364 1004 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 POU4F1Q01851 419 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 ZNF155Q12901 538 aaPredicted RBP9.03□□□□□ -0.96
SSX3-204ENST00000612497 MLC1Q15049 377 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 ZSWIM7Q19AV6 140 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 TCHHL1Q5QJ38 904 aaPredicted RBP9.03□□□□□ -0.96
SSX3-204ENST00000612497 CPTPQ5TA50 214 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 THSD4Q6ZMP0 1018 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 USP43Q70EL4 1123 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 FCRLAQ7L513 359 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 SLC46A3Q7Z3Q1 461 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 LILRA2Q8N149 483 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 SVOPLQ8N434 492 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 CDYL2Q8N8U2 506 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 OR9A2Q8NGT5 310 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 STAG3L4Q8TBR4 150 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 WDR20Q8TBZ3 569 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 ZNF675Q8TD23 568 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 CPNE4Q96A23 557 aaPredicted RBP9.03□□□□□ -0.96
SSX3-204ENST00000612497 ERP27Q96DN0 273 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 TSPAN17Q96FV3 270 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 KLHL15Q96M94 604 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 ZNF681Q96N22 645 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 BAG1Q99933 345 aaPredicted RBP9.03□□□□□ -0.96
SSX3-204ENST00000612497 MRPL1Q9BYD6 325 aaKnown RBP9.03□□□□□ -0.96
SSX3-204ENST00000612497 SRXN1Q9BYN0 137 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 RHOJQ9H4E5 214 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 ALG9Q9H6U8 611 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 FKRPQ9H9S5 495 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 ADAM29Q9UKF5 820 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 UTS2RQ9UKP6 389 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 RNF11Q9Y3C5 154 aa9.03□□□□□ -0.96
SSX3-204ENST00000612497 CMYA5Q8N3K9 4069 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms