RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 TBXA2RP21731 343 aa13.07□□□□□ -0.32
TUBE1-208ENST00000604743 IL12AP29459 219 aa13.07□□□□□ -0.32
TUBE1-208ENST00000604743 GFRA1P56159 465 aa13.07□□□□□ -0.32
TUBE1-208ENST00000604743 PPP2R2AP63151 447 aa13.07□□□□□ -0.32
TUBE1-208ENST00000604743 DCST2Q5T1A1 773 aa13.07□□□□□ -0.32
TUBE1-208ENST00000604743 AAGABQ6PD74 315 aa13.07□□□□□ -0.32
TUBE1-208ENST00000604743 SEM1Q6ZVN7 128 aa13.07□□□□□ -0.32
TUBE1-208ENST00000604743 TNIP2Q8NFZ5 429 aa13.07□□□□□ -0.32
TUBE1-208ENST00000604743 SH3YL1Q96HL8 342 aaPredicted RBP13.07□□□□□ -0.32
TUBE1-208ENST00000604743 OR52B2Q96RD2 323 aa13.07□□□□□ -0.32
TUBE1-208ENST00000604743 VIPAS39Q9H9C1 493 aa13.07□□□□□ -0.32
TUBE1-208ENST00000604743 SLCO1B3Q9NPD5 702 aa13.07□□□□□ -0.32
TUBE1-208ENST00000604743 KCNJ16Q9NPI9 418 aa13.07□□□□□ -0.32
TUBE1-208ENST00000604743 MRPS18CQ9Y3D5 142 aaKnown RBP13.07□□□□□ -0.32
TUBE1-208ENST00000604743 GPR45Q9Y5Y3 372 aa13.07□□□□□ -0.32
TUBE1-208ENST00000604743 USH1CQ9Y6N9 552 aa13.07□□□□□ -0.32
TUBE1-208ENST00000604743 ITPR2Q14571 2701 aa13.07□□□□□ -0.32
TUBE1-208ENST00000604743 MAST4O15021 2626 aa13.07□□□□□ -0.32
TUBE1-208ENST00000604743 SHISA8B8ZZ34 492 aa13.06□□□□□ -0.32
TUBE1-208ENST00000604743 ALG1L2C9J202 215 aa13.06□□□□□ -0.32
TUBE1-208ENST00000604743 ZNF195O14628 629 aa13.06□□□□□ -0.32
TUBE1-208ENST00000604743 SASH3O75995 380 aa13.06□□□□□ -0.32
TUBE1-208ENST00000604743 TOXO94900 526 aa13.06□□□□□ -0.32
TUBE1-208ENST00000604743 UQCRC2P22695 453 aa13.06□□□□□ -0.32
TUBE1-208ENST00000604743 CHI3L1P36222 383 aaPredicted RBP13.06□□□□□ -0.32
TUBE1-208ENST00000604743 RCAN2Q14206 197 aa13.06□□□□□ -0.32
TUBE1-208ENST00000604743 SF3B4Q15427 424 aaKnown RBP eCLIP13.06□□□□□ -0.325e-13■□□□□ 10.4
TUBE1-208ENST00000604743 DPY19L1Q2PZI1 675 aa13.06□□□□□ -0.32
TUBE1-208ENST00000604743 RIPPLY2Q5TAB7 128 aa13.06□□□□□ -0.32
TUBE1-208ENST00000604743 PLXDC2Q6UX71 529 aa13.06□□□□□ -0.32
TUBE1-208ENST00000604743 LIX1LQ8IVB5 337 aa13.06□□□□□ -0.32
TUBE1-208ENST00000604743 UBQLNLQ8IYU4 475 aa13.06□□□□□ -0.32
TUBE1-208ENST00000604743 ZNF614Q8N883 585 aa13.06□□□□□ -0.32
TUBE1-208ENST00000604743 ACTRT2Q8TDY3 377 aa13.06□□□□□ -0.32
TUBE1-208ENST00000604743 C1GALT1C1Q96EU7 318 aa13.06□□□□□ -0.32
TUBE1-208ENST00000604743 MAELQ96JY0 434 aaKnown RBP13.06□□□□□ -0.32
TUBE1-208ENST00000604743 TUBA1CQ9BQE3 449 aa13.06□□□□□ -0.32
TUBE1-208ENST00000604743 OR51I1Q9H343 314 aa13.06□□□□□ -0.32
TUBE1-208ENST00000604743 SERHL2Q9H4I8 314 aa13.06□□□□□ -0.32
TUBE1-208ENST00000604743 UBQLN4Q9NRR5 601 aa13.06□□□□□ -0.32
TUBE1-208ENST00000604743 INTS9Q9NV88 658 aaKnown RBP13.06□□□□□ -0.32
TUBE1-208ENST00000604743 VDAC3Q9Y277 283 aa13.06□□□□□ -0.32
TUBE1-208ENST00000604743 HEATR5AQ86XA9 2040 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 FAM47E-STBD1D6RA91 191 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 H3BML4 177 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 UBDO15205 165 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 SLC22A3O75751 556 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 IL2RAP01589 272 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 PGRP06401 933 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 IDO1P14902 403 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 CPN1P15169 458 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 CHMP24386 653 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 LHX2P50458 406 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 B3GALT5-AS1P59052 145 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 GANABQ14697 944 aaKnown RBP13.05□□□□□ -0.32
TUBE1-208ENST00000604743 FLYWCH1Q4VC44 716 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 NSUN5P2Q63ZY6 315 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 TNFAIP8L2Q6P589 184 aaPredicted RBP13.05□□□□□ -0.32
TUBE1-208ENST00000604743 ARSKQ6UWY0 536 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 OLIG3Q7RTU3 272 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 LACC1Q8IV20 430 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 NAXEQ8NCW5 288 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 PHOSPHO1Q8TCT1 267 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 SMPDL3BQ92485 455 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 C7orf26Q96N11 449 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 OR52E6Q96RD3 313 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 PANX1Q96RD7 426 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 SLC35A5Q9BS91 424 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 RUBCNLQ9H714 662 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 ZNF337Q9Y3M9 751 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 NOTCH2Q04721 2471 aa13.05□□□□□ -0.32
TUBE1-208ENST00000604743 DUXAA6NLW8 204 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 CLCA1A8K7I4 914 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 HSPB2A8KAH6 182 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 SEC14L5O43304 696 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 SOX30O94993 753 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 GSNP06396 782 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 NGFRP08138 427 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 OR12D1P0DN82 309 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 POU3F2P20265 443 aaPredicted RBP13.04□□□□□ -0.32
TUBE1-208ENST00000604743 BMP5P22003 454 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 LCN1P31025 176 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 AGFG1P52594 562 aaKnown RBP13.04□□□□□ -0.32
TUBE1-208ENST00000604743 CLDN18P56856 261 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 GPR68Q15743 365 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 CD226Q15762 336 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 HSPB2Q16082 182 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 PDCD4Q53EL6 469 aaKnown RBP13.04□□□□□ -0.32
TUBE1-208ENST00000604743 EPGNQ6UW88 154 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 MEX3BQ6ZN04 569 aaKnown RBP13.04□□□□□ -0.32
TUBE1-208ENST00000604743 ZNF621Q6ZSS3 439 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 CHMP1BQ7LBR1 199 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 C16orf62Q7Z3J2 963 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 MCEMP1Q8IX19 187 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 ZNF527Q8NB42 609 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 ZPLD1Q8TCW7 415 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 XAGE5Q8WWM1 108 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 RAB8BQ92930 207 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 CCDC115Q96NT0 180 aa13.04□□□□□ -0.32
TUBE1-208ENST00000604743 SDF2Q99470 211 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms