RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 UPF3AQ9H1J1 476 aaKnown RBP3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 LCMT1Q9UIC8 334 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 ZNF221Q9UK13 617 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 RASD1Q9Y272 281 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 PIGLQ9Y2B2 252 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 FRMPD4Q14CM0 1322 aa3.39□□□□□ -1.87
AC004542.1-201ENST00000602955 IFITM10A6NMD0 228 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 FOXI3A8MTJ6 420 aaPredicted RBP3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 PRSS44E7EML9 344 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 NBR2O15453 112 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 SRPX2O60687 465 aaPredicted RBP3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 ERLIN1O75477 346 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 SEMA4FO95754 770 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 IGHG3P01860 377 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 UQCRFS1P1P0C7P4 283 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 SLC2A3P11169 496 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 POU2F1P14859 743 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 SDC1P18827 310 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 MMP11P24347 488 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 P2RY1P47900 373 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 PRELPP51888 382 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 SUCLG1P53597 346 aaKnown RBP3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 SEC61GP60059 68 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 RPL8P62917 257 aaKnown RBP3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 GBE1Q04446 702 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 RIPPLY1Q0D2K3 151 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 MRPL28Q13084 256 aaKnown RBP3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 MXD4Q14582 209 aaPredicted RBP3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 SLC5A12Q1EHB4 618 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 C14orf28Q4W4Y0 310 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 VWA2Q5GFL6 755 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 MS4A13Q5J8X5 152 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 FAM182AQ5T1J6 154 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 ARMCX5Q6P1M9 558 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 FAHD2BQ6P2I3 314 aaPredicted RBP3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 RFWD3Q6PCD5 774 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 KCNIP4Q6PIL6 250 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 METAP1DQ6UB28 335 aaPredicted RBP3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 APTXQ7Z2E3 356 aaKnown RBP3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 PHC2Q8IXK0 858 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 DHRSXQ8N5I4 330 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 NECAB1Q8N987 351 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 TRPV1Q8NER1 839 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 CNIH3Q8TBE1 160 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 BADQ92934 168 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 FAHD2AQ96GK7 314 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 SLC45A3Q96JT2 553 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 RPRD1AQ96P16 312 aaPredicted RBP3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 PARD6BQ9BYG5 372 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 LRRN3Q9H3W5 708 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 AMBNQ9NP70 447 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 MEPEQ9NQ76 525 aaPredicted RBP3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 ZDHHC18Q9NUE0 388 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 ETNK2Q9NVF9 386 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 FAM120CQ9NX05 1096 aaKnown RBP3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 ELOVL2Q9NXB9 296 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 RCOR3Q9P2K3 495 aaPredicted RBP3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 ONECUT1Q9UBC0 465 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 TMED5Q9Y3A6 229 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 OARD1Q9Y530 152 aa3.38□□□□□ -1.87
AC004542.1-201ENST00000602955 IGHV3OR16-12A0A075B7B8 117 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 GOLGA8OA6NCC3 632 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 OR6C65A6NJZ3 312 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 SNTNA6NMZ2 147 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 E9PBE3 544 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 GOLGA8NF8WBI6 632 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 SOCS3O14543 225 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 TAPBPO15533 448 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 MED7O43513 233 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 EDIL3O43854 480 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 N4BP1O75113 896 aaKnown RBP3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 LRATO95237 230 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 NDUFB10O96000 172 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 CA1P00915 261 aaPredicted RBP3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 MX1P20591 662 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 LMO2P25791 158 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 MAGEA8P43361 318 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 GNPDA1P46926 289 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 GSK3BP49841 420 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 ATP4BP51164 291 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 ARHGDIAP52565 204 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 CDH4P55283 916 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 BST1Q10588 318 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 RAB40BQ12829 278 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 C1orf61Q13536 156 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 SSX2Q16385 188 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 IMMTQ16891 758 aaKnown RBP3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 C17orf58Q2M2W7 97 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 SFT2D3Q587I9 215 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 LGSNQ5TDP6 509 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 PVRIGQ6DKI7 326 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 OR4F3Q6IEY1 312 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 DOK6Q6PKX4 331 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 FAM228AQ86W67 206 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 CATSPER3Q86XQ3 398 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 LINC01561Q8N1V8 128 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 UBE2J2Q8N2K1 259 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 BBS5Q8N3I7 341 aa3.37□□□□□ -1.87
AC004542.1-201ENST00000602955 C15orf54Q8N8G6 183 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms