RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 CLCF1Q9UBD9 225 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 ZNF337Q9Y3M9 751 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 SNX8Q9Y5X2 465 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 AP4B1Q9Y6B7 739 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 PHF3Q92576 2039 aaKnown RBP9.5□□□□□ -0.89
CCDC9-203ENST00000596938 OR2M5A3KFT3 312 aa9.5□□□□□ -0.89
CCDC9-203ENST00000596938 FAM221AA4D161 298 aa9.5□□□□□ -0.89
CCDC9-203ENST00000596938 RNASET2O00584 256 aaKnown RBP9.5□□□□□ -0.89
CCDC9-203ENST00000596938 ERLIN1O75477 346 aa9.5□□□□□ -0.89
CCDC9-203ENST00000596938 CRHP06850 196 aa9.5□□□□□ -0.89
CCDC9-203ENST00000596938 HPGDP15428 266 aa9.5□□□□□ -0.89
CCDC9-203ENST00000596938 POU3F2P20265 443 aaPredicted RBP9.5□□□□□ -0.89
CCDC9-203ENST00000596938 SUCLG1P53597 346 aaKnown RBP9.5□□□□□ -0.89
CCDC9-203ENST00000596938 CLDN15P56746 228 aa9.5□□□□□ -0.89
CCDC9-203ENST00000596938 HBA1P69905 142 aa9.5□□□□□ -0.89
CCDC9-203ENST00000596938 FOXF2Q12947 444 aa9.5□□□□□ -0.89
CCDC9-203ENST00000596938 MYBPHQ13203 477 aa9.5□□□□□ -0.89
CCDC9-203ENST00000596938 LASP1Q14847 261 aaKnown RBP9.5□□□□□ -0.89
CCDC9-203ENST00000596938 PDCD2Q16342 344 aaPredicted RBP9.5□□□□□ -0.89
CCDC9-203ENST00000596938 PGS1Q32NB8 556 aa9.5□□□□□ -0.89
CCDC9-203ENST00000596938 SPDYE7PQ495Y7 208 aa9.5□□□□□ -0.89
CCDC9-203ENST00000596938 HHATQ5VTY9 493 aa9.5□□□□□ -0.89
CCDC9-203ENST00000596938 RAET1LQ5VY80 246 aa9.5□□□□□ -0.89
CCDC9-203ENST00000596938 ZAR1Q86SH2 424 aa9.5□□□□□ -0.89
CCDC9-203ENST00000596938 KIF18BQ86Y91 864 aa9.5□□□□□ -0.89
CCDC9-203ENST00000596938 ADAMTS15Q8TE58 950 aa9.5□□□□□ -0.89
CCDC9-203ENST00000596938 FAM222BQ8WU58 562 aa9.5□□□□□ -0.89
CCDC9-203ENST00000596938 INTS12Q96CB8 462 aaKnown RBP9.5□□□□□ -0.89
CCDC9-203ENST00000596938 YIPF4Q9BSR8 244 aa9.5□□□□□ -0.89
CCDC9-203ENST00000596938 PIGMQ9H3S5 423 aa9.5□□□□□ -0.89
CCDC9-203ENST00000596938 MEAF6Q9HAF1 191 aa9.5□□□□□ -0.89
CCDC9-203ENST00000596938 STOML1Q9UBI4 398 aa9.5□□□□□ -0.89
CCDC9-203ENST00000596938 FAF1Q9UNN5 650 aaPredicted RBP9.5□□□□□ -0.89
CCDC9-203ENST00000596938 PRSS51A0A1B0GVH4 220 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 TMEM120BA0PK00 339 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 C7orf72A4D263 438 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 DUXAA6NLW8 204 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 SCDO00767 359 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 ANKRD28O15084 1053 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 CFLARO15519 480 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 SCN2BO60939 215 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 CTAG2O75638 210 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 TGM6O95932 706 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 LBPP18428 481 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 TCEA1P23193 301 aaKnown RBP9.49□□□□□ -0.89
CCDC9-203ENST00000596938 PCYT1AP49585 367 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 AGFG1P52594 562 aaKnown RBP9.49□□□□□ -0.89
CCDC9-203ENST00000596938 WDR4P57081 412 aaKnown RBP9.49□□□□□ -0.89
CCDC9-203ENST00000596938 SORDQ00796 357 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 BST1Q10588 318 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 TP53BP2Q13625 1128 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 DAZAP2Q15038 168 aaPredicted RBP9.49□□□□□ -0.89
CCDC9-203ENST00000596938 KLHL26Q53HC5 615 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 BEND6Q5SZJ8 279 aaPredicted RBP9.49□□□□□ -0.89
CCDC9-203ENST00000596938 ANXA8L1Q5VT79 327 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 OR2A2Q6IF42 318 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 MTERF4Q7Z6M4 381 aaKnown RBP9.49□□□□□ -0.89
CCDC9-203ENST00000596938 GALNT10Q86SR1 603 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 GRAMD2AQ8IUY3 354 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 FBXO30Q8TB52 745 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 JADE3Q92613 823 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 CDS1Q92903 461 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 ZBTB8AQ96BR9 441 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 TESCQ96BS2 214 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 PPP1R36Q96LQ0 422 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 PAIP2Q9BPZ3 127 aaKnown RBP9.49□□□□□ -0.89
CCDC9-203ENST00000596938 NUF2Q9BZD4 464 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 DPY30Q9C005 99 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 PNPOQ9NVS9 261 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 THAP1Q9NVV9 213 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 CRIM1Q9NZV1 1036 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 PCDHGB4Q9UN71 923 aa9.49□□□□□ -0.89
CCDC9-203ENST00000596938 NCKAP5O14513 1909 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 CACNA1CQ13936 2221 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 TUBAL3A6NHL2 446 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 SLC22A20A6NK97 555 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 A8MXE2 369 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 NPIPB9F8W1W9 429 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 TNFSF13O75888 250 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 ZNF17P17021 662 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 ATP6V1C1P21283 382 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 PSMA4P25789 261 aaKnown RBP9.48□□□□□ -0.89
CCDC9-203ENST00000596938 ATP12AP54707 1039 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 CLDN20P56880 219 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 FLYWCH1Q4VC44 716 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 DCST2Q5T1A1 773 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 CCNJQ5T5M9 372 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 AP1ARQ63HQ0 302 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 OR4F3Q6IEY1 312 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 OGFOD2Q6N063 350 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 PLXDC2Q6UX71 529 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 P4HA3Q7Z4N8 544 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 C6orf120Q7Z4R8 191 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 SPATA19Q7Z5L4 167 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 UBQLNLQ8IYU4 475 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 GTPBP8Q8N3Z3 284 aaPredicted RBP9.48□□□□□ -0.89
CCDC9-203ENST00000596938 METTL25Q8N6Q8 603 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 ANKRD42Q8N9B4 389 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 ZNF527Q8NB42 609 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms