RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 CHMP6Q96FZ7 201 aa21.17■□□□□ 0.98
LSM4-204ENST00000594828 PKNOX2Q96KN3 472 aa21.17■□□□□ 0.98
LSM4-204ENST00000594828 BTBD2Q9BX70 525 aa21.17■□□□□ 0.98
LSM4-204ENST00000594828 PINK1Q9BXM7 581 aa21.17■□□□□ 0.98
LSM4-204ENST00000594828 UBQLN4Q9NRR5 601 aa21.17■□□□□ 0.98
LSM4-204ENST00000594828 FBXO34Q9NWN3 711 aa21.17■□□□□ 0.98
LSM4-204ENST00000594828 EIF3LQ9Y262 564 aaKnown RBP21.17■□□□□ 0.98
LSM4-204ENST00000594828 AP4B1Q9Y6B7 739 aa21.17■□□□□ 0.98
LSM4-204ENST00000594828 CCDC168Q8NDH2 2452 aa21.16■□□□□ 0.98
LSM4-204ENST00000594828 WDR91A4D1P6 747 aa21.16■□□□□ 0.98
LSM4-204ENST00000594828 HSPA4LO95757 839 aa21.16■□□□□ 0.98
LSM4-204ENST00000594828 CD1EP15812 388 aa21.16■□□□□ 0.98
LSM4-204ENST00000594828 PRPS1L1P21108 318 aa21.16■□□□□ 0.98
LSM4-204ENST00000594828 CCT3P49368 545 aaKnown RBP21.16■□□□□ 0.98
LSM4-204ENST00000594828 CLDN20P56880 219 aa21.16■□□□□ 0.98
LSM4-204ENST00000594828 RPS3AP61247 264 aaKnown RBP21.16■□□□□ 0.98
LSM4-204ENST00000594828 POU6F2P78424 691 aaPredicted RBP21.16■□□□□ 0.98
LSM4-204ENST00000594828 LASP1Q14847 261 aaKnown RBP21.16■□□□□ 0.98
LSM4-204ENST00000594828 TMEM44Q2T9K0 475 aa21.16■□□□□ 0.98
LSM4-204ENST00000594828 LSM12Q3MHD2 195 aaKnown RBP21.16■□□□□ 0.98
LSM4-204ENST00000594828 FBXW10Q5XX13 1052 aa21.16■□□□□ 0.98
LSM4-204ENST00000594828 KRTCAP2Q8N6L1 136 aa21.16■□□□□ 0.98
LSM4-204ENST00000594828 GATSQ8NAP1 163 aa21.16■□□□□ 0.98
LSM4-204ENST00000594828 NUDT8Q8WV74 236 aa21.16■□□□□ 0.98
LSM4-204ENST00000594828 SMPDL3BQ92485 455 aa21.16■□□□□ 0.98
LSM4-204ENST00000594828 FIG4Q92562 907 aa21.16■□□□□ 0.98
LSM4-204ENST00000594828 NINJ1Q92982 152 aa21.16■□□□□ 0.98
LSM4-204ENST00000594828 COQ8BQ96D53 544 aa21.16■□□□□ 0.98
LSM4-204ENST00000594828 STACQ99469 402 aa21.16■□□□□ 0.98
LSM4-204ENST00000594828 LIME1Q9H400 295 aa21.16■□□□□ 0.98
LSM4-204ENST00000594828 DUSP22Q9NRW4 184 aa21.16■□□□□ 0.98
LSM4-204ENST00000594828 STOML1Q9UBI4 398 aa21.16■□□□□ 0.98
LSM4-204ENST00000594828 EDARQ9UNE0 448 aa21.16■□□□□ 0.98
LSM4-204ENST00000594828 VDAC3Q9Y277 283 aa21.16■□□□□ 0.98
LSM4-204ENST00000594828 PCNX3Q9H6A9 2034 aa21.16■□□□□ 0.98
LSM4-204ENST00000594828 SHISA8B8ZZ34 492 aa21.15■□□□□ 0.98
LSM4-204ENST00000594828 SCDO00767 359 aa21.15■□□□□ 0.98
LSM4-204ENST00000594828 MSTNO14793 375 aa21.15■□□□□ 0.98
LSM4-204ENST00000594828 ITM2AO43736 263 aa21.15■□□□□ 0.98
LSM4-204ENST00000594828 ZNF500O60304 480 aaPredicted RBP21.15■□□□□ 0.98
LSM4-204ENST00000594828 MAD2L1Q13257 205 aaPredicted RBP21.15■□□□□ 0.98
LSM4-204ENST00000594828 CCNJQ5T5M9 372 aa21.15■□□□□ 0.98
LSM4-204ENST00000594828 MED12LQ86YW9 2145 aa21.15■□□□□ 0.98
LSM4-204ENST00000594828 CNEP1R1Q8N9A8 125 aa21.15■□□□□ 0.98
LSM4-204ENST00000594828 PSMA8Q8TAA3 256 aa21.15■□□□□ 0.98
LSM4-204ENST00000594828 STARD4Q96DR4 205 aa21.15■□□□□ 0.98
LSM4-204ENST00000594828 PIGUQ9H490 435 aa21.15■□□□□ 0.98
LSM4-204ENST00000594828 GIN1Q9NXP7 522 aa21.15■□□□□ 0.98
LSM4-204ENST00000594828 ST6GALNAC2Q9UJ37 374 aa21.15■□□□□ 0.98
LSM4-204ENST00000594828 ZNF175Q9Y473 711 aa21.15■□□□□ 0.98
LSM4-204ENST00000594828 A0A087WZY1 265 aa21.14■□□□□ 0.97
LSM4-204ENST00000594828 BIRC5O15392 142 aa21.14■□□□□ 0.97
LSM4-204ENST00000594828 SMNDC1O75940 238 aaKnown RBP eCLIP21.14■□□□□ 0.97
LSM4-204ENST00000594828 C6orf47O95873 294 aa21.14■□□□□ 0.97
LSM4-204ENST00000594828 SERPINE1P05121 402 aa21.14■□□□□ 0.97
LSM4-204ENST00000594828 G6PDP11413 515 aa21.14■□□□□ 0.97
LSM4-204ENST00000594828 OCRLQ01968 901 aa21.14■□□□□ 0.97
LSM4-204ENST00000594828 EMX2Q04743 252 aa21.14■□□□□ 0.97
LSM4-204ENST00000594828 TP53BP2Q13625 1128 aa21.14■□□□□ 0.97
LSM4-204ENST00000594828 CHI3L2Q15782 390 aa21.14■□□□□ 0.97
LSM4-204ENST00000594828 SGCBQ16585 318 aa21.14■□□□□ 0.97
LSM4-204ENST00000594828 SPDYE7PQ495Y7 208 aa21.14■□□□□ 0.97
LSM4-204ENST00000594828 CDC73Q6P1J9 531 aa21.14■□□□□ 0.97
LSM4-204ENST00000594828 MISPQ8IVT2 679 aa21.14■□□□□ 0.97
LSM4-204ENST00000594828 RIMKLAQ8IXN7 391 aa21.14■□□□□ 0.97
LSM4-204ENST00000594828 OR56A1Q8NGH5 318 aa21.14■□□□□ 0.97
LSM4-204ENST00000594828 CDS1Q92903 461 aa21.14■□□□□ 0.97
LSM4-204ENST00000594828 ZNF845Q96IR2 970 aaPredicted RBP21.14■□□□□ 0.97
LSM4-204ENST00000594828 DACH2Q96NX9 599 aa21.14■□□□□ 0.97
LSM4-204ENST00000594828 ACTRT3Q9BYD9 372 aa21.14■□□□□ 0.97
LSM4-204ENST00000594828 BHLHE41Q9C0J9 482 aaPredicted RBP21.14■□□□□ 0.97
LSM4-204ENST00000594828 CXorf36Q9H7Y0 433 aa21.14■□□□□ 0.97
LSM4-204ENST00000594828 ZNF395Q9H8N7 513 aaPredicted RBP21.14■□□□□ 0.97
LSM4-204ENST00000594828 SSU72Q9NP77 194 aaKnown RBP21.14■□□□□ 0.97
LSM4-204ENST00000594828 CCM2LQ9NUG4 571 aaPredicted RBP21.14■□□□□ 0.97
LSM4-204ENST00000594828 FAF1Q9UNN5 650 aaPredicted RBP21.14■□□□□ 0.97
LSM4-204ENST00000594828 A0A1W2PQD3 144 aa21.13■□□□□ 0.97
LSM4-204ENST00000594828 CFLARO15519 480 aa21.13■□□□□ 0.97
LSM4-204ENST00000594828 SOX30O94993 753 aa21.13■□□□□ 0.97
LSM4-204ENST00000594828 ZNF17P17021 662 aa21.13■□□□□ 0.97
LSM4-204ENST00000594828 CPOXP36551 454 aa21.13■□□□□ 0.97
LSM4-204ENST00000594828 ABCE1P61221 599 aaKnown RBP21.13■□□□□ 0.97
LSM4-204ENST00000594828 PON3Q15166 354 aa21.13■□□□□ 0.97
LSM4-204ENST00000594828 VWA1Q6PCB0 445 aa21.13■□□□□ 0.97
LSM4-204ENST00000594828 METTL25Q8N6Q8 603 aa21.13■□□□□ 0.97
LSM4-204ENST00000594828 FNDC9Q8TBE3 224 aa21.13■□□□□ 0.97
LSM4-204ENST00000594828 ACTRT2Q8TDY3 377 aa21.13■□□□□ 0.97
LSM4-204ENST00000594828 ADAMTS15Q8TE58 950 aa21.13■□□□□ 0.97
LSM4-204ENST00000594828 PGM2Q96G03 612 aa21.13■□□□□ 0.97
LSM4-204ENST00000594828 SH3YL1Q96HL8 342 aaPredicted RBP21.13■□□□□ 0.97
LSM4-204ENST00000594828 DUSP26Q9BV47 211 aa21.13■□□□□ 0.97
LSM4-204ENST00000594828 CENPHQ9H3R5 247 aa21.13■□□□□ 0.97
LSM4-204ENST00000594828 RNF122Q9H9V4 155 aa21.13■□□□□ 0.97
LSM4-204ENST00000594828 NOP53Q9NZM5 478 aaKnown RBP21.13■□□□□ 0.97
LSM4-204ENST00000594828 MPDZO75970 2070 aa21.13■□□□□ 0.97
LSM4-204ENST00000594828 TM9SF1O15321 606 aa21.12■□□□□ 0.97
LSM4-204ENST00000594828 GOSR1O95249 250 aa21.12■□□□□ 0.97
LSM4-204ENST00000594828 ATP6V1C1P21283 382 aa21.12■□□□□ 0.97
LSM4-204ENST00000594828 KIR2DL2P43627 348 aaPredicted RBP21.12■□□□□ 0.97
LSM4-204ENST00000594828 ZNF41P51814 821 aaPredicted RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms