RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 TBXA2RP21731 343 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 RPL14P50914 215 aaKnown RBP12.53□□□□□ -0.4
APOC1-208ENST00000592535 SUCLG1P53597 346 aaKnown RBP12.53□□□□□ -0.4
APOC1-208ENST00000592535 TPD52P55327 224 aaPredicted RBP12.53□□□□□ -0.4
APOC1-208ENST00000592535 CLDN8P56748 225 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 C21orf58P58505 322 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 TP53BP2Q13625 1128 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 SMU1Q2TAY7 513 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 LSM12Q3MHD2 195 aaKnown RBP12.53□□□□□ -0.4
APOC1-208ENST00000592535 SPDYE7PQ495Y7 208 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 CDC73Q6P1J9 531 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 CROCCP2Q86T23 111 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 CDH24Q86UP0 819 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 MEIOBQ8N635 442 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 ANKRD42Q8N9B4 389 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 OR56A1Q8NGH5 318 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 STACQ99469 402 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 PAIP2Q9BPZ3 127 aaKnown RBP12.53□□□□□ -0.4
APOC1-208ENST00000592535 SFXN3Q9BWM7 321 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 BTBD2Q9BX70 525 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 ACTRT3Q9BYD9 372 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 PIGUQ9H490 435 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 DUSP22Q9NRW4 184 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 GPATCH2Q9NW75 528 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 HAO1Q9UJM8 370 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 FOXD3Q9UJU5 478 aaPredicted RBP12.53□□□□□ -0.4
APOC1-208ENST00000592535 VDAC3Q9Y277 283 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 CSMD1Q96PZ7 3565 aa12.53□□□□□ -0.4
APOC1-208ENST00000592535 CSMD2Q7Z408 3487 aa12.52□□□□□ -0.4
APOC1-208ENST00000592535 CFLARO15519 480 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 SEC14L5O43304 696 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 LCN1P31025 176 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 PEX19P40855 299 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 CLDN20P56880 219 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 HBA1P69905 142 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 BST1Q10588 318 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 STX3Q13277 289 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 PGS1Q32NB8 556 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 GLYR1Q49A26 553 aaPredicted RBP12.52□□□□□ -0.41
APOC1-208ENST00000592535 FLYWCH1Q4VC44 716 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 OR4F3Q6IEY1 312 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 CHMP1BQ7LBR1 199 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 P4HA3Q7Z4N8 544 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 CAMKMTQ7Z624 323 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 CLECL1Q8IZS7 167 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 OR5AK3PQ8NH89 298 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 GOT1L1Q8NHS2 421 aaPredicted RBP12.52□□□□□ -0.41
APOC1-208ENST00000592535 SFXN5Q8TD22 340 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 ADAMTS15Q8TE58 950 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 SMPDL3BQ92485 455 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 FIG4Q92562 907 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 NPAS1Q99742 590 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 KLHDC3Q9BQ90 382 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 PIGQQ9BRB3 760 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 NUF2Q9BZD4 464 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 NEUROD4Q9HD90 331 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 UBQLN4Q9NRR5 601 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 PNPOQ9NVS9 261 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 GIN1Q9NXP7 522 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 FAF1Q9UNN5 650 aaPredicted RBP12.52□□□□□ -0.41
APOC1-208ENST00000592535 KCNE3Q9Y6H6 103 aa12.52□□□□□ -0.41
APOC1-208ENST00000592535 ANKRD17O75179 2603 aaKnown RBP12.52□□□□□ -0.41
APOC1-208ENST00000592535 NPIPA5A0A0B4J1W7 369 aa12.51□□□□□ -0.41
APOC1-208ENST00000592535 SLC22A20A6NK97 555 aa12.51□□□□□ -0.41
APOC1-208ENST00000592535 NPIPA7E9PJI5 369 aa12.51□□□□□ -0.41
APOC1-208ENST00000592535 LINC01387J3KSC0 135 aa12.51□□□□□ -0.41
APOC1-208ENST00000592535 SCDO00767 359 aa12.51□□□□□ -0.41
APOC1-208ENST00000592535 CTAG2O75638 210 aa12.51□□□□□ -0.41
APOC1-208ENST00000592535 SNUPNO95149 360 aaKnown RBP12.51□□□□□ -0.41
APOC1-208ENST00000592535 NPIPA8P0DM63 369 aa12.51□□□□□ -0.41
APOC1-208ENST00000592535 HPGDP15428 266 aa12.51□□□□□ -0.41
APOC1-208ENST00000592535 SOAT1P35610 550 aa12.51□□□□□ -0.41
APOC1-208ENST00000592535 WDR4P57081 412 aaKnown RBP12.51□□□□□ -0.41
APOC1-208ENST00000592535 CD226Q15762 336 aa12.51□□□□□ -0.41
APOC1-208ENST00000592535 TMEM44Q2T9K0 475 aa12.51□□□□□ -0.41
APOC1-208ENST00000592535 DCST2Q5T1A1 773 aa12.51□□□□□ -0.41
APOC1-208ENST00000592535 HHATQ5VTY9 493 aa12.51□□□□□ -0.41
APOC1-208ENST00000592535 LUZP2Q86TE4 346 aa12.51□□□□□ -0.41
APOC1-208ENST00000592535 CLEC4FQ8N1N0 589 aa12.51□□□□□ -0.41
APOC1-208ENST00000592535 NRGNQ92686 78 aa12.51□□□□□ -0.41
APOC1-208ENST00000592535 MOAP1Q96BY2 351 aa12.51□□□□□ -0.41
APOC1-208ENST00000592535 SH3YL1Q96HL8 342 aaPredicted RBP12.51□□□□□ -0.41
APOC1-208ENST00000592535 OR7D2Q96RA2 312 aa12.51□□□□□ -0.41
APOC1-208ENST00000592535 PINK1Q9BXM7 581 aa12.51□□□□□ -0.41
APOC1-208ENST00000592535 ACBD3Q9H3P7 528 aa12.51□□□□□ -0.41
APOC1-208ENST00000592535 AP4B1Q9Y6B7 739 aa12.51□□□□□ -0.41
APOC1-208ENST00000592535 ANKHD1Q8IWZ3 2542 aaKnown RBP12.51□□□□□ -0.41
APOC1-208ENST00000592535 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.5□□□□□ -0.41
APOC1-208ENST00000592535 A0A1W2PNV4 684 aa12.5□□□□□ -0.41
APOC1-208ENST00000592535 A0A1W2PQD3 144 aa12.5□□□□□ -0.41
APOC1-208ENST00000592535 TMEM120BA0PK00 339 aa12.5□□□□□ -0.41
APOC1-208ENST00000592535 TNFSF13O75888 250 aa12.5□□□□□ -0.41
APOC1-208ENST00000592535 KRT16P08779 473 aa12.5□□□□□ -0.41
APOC1-208ENST00000592535 ATP6V1C1P21283 382 aa12.5□□□□□ -0.41
APOC1-208ENST00000592535 RNF144AP50876 292 aaPredicted RBP12.5□□□□□ -0.41
APOC1-208ENST00000592535 EEFSECP57772 596 aaKnown RBP12.5□□□□□ -0.41
APOC1-208ENST00000592535 RPS26P62854 115 aaKnown RBP12.5□□□□□ -0.41
APOC1-208ENST00000592535 GGNQ86UU5 652 aa12.5□□□□□ -0.41
APOC1-208ENST00000592535 KIF18BQ86Y91 864 aa12.5□□□□□ -0.41
APOC1-208ENST00000592535 KIRREL3Q8IZU9 778 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms