RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 GSTK1Q9Y2Q3 226 aa17.81■□□□□ 0.44
PRKCSH-209ENST00000589838 MN1Q10571 1320 aaPredicted RBP17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 IQCMA0A1B0GVH7 501 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 BLACEA4D250 179 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 WWP2O00308 870 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 CTDSP2O14595 271 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 CHST10O43529 356 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 OR10H2O60403 315 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 BRINP1O60477 761 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 NKX2-2O95096 273 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 NTN1O95631 604 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 ZNF155Q12901 538 aaPredicted RBP17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 EXOSC7Q15024 291 aaKnown RBP17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 ZNHIT3Q15649 155 aaPredicted RBP17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 GID4Q8IVV7 300 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 PSD4Q8NDX1 1056 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 TMEM239Q8WW34 195 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 SAMD8Q96LT4 415 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 KCTD7Q96MP8 289 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 CD180Q99467 661 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 GDF15Q99988 308 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 PRSS27Q9BQR3 290 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 ZNF559Q9BR84 538 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 ARHGAP9Q9BRR9 750 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 MED18Q9BUE0 208 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 TMEM27Q9HBJ8 222 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 SGK494L7N484 410 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 RCBTB2O95199 551 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 CH25HO95992 272 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 CELA2BP08218 269 aaPredicted RBP17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 BMP7P18075 431 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 TNFSF8P32971 234 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 VWA5B2Q8N398 1253 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 KLHL36Q8N4N3 616 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 GATAD2BQ8WXI9 593 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 HOXB13Q92826 284 aaPredicted RBP17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 HS6ST2Q96MM7 605 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 GPR174Q9BXC1 333 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 UBQLN3Q9H347 655 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 FN3KQ9H479 309 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 POLE4Q9NR33 117 aa17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 WSB2Q9NYS7 404 aaPredicted RBP17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 ZNF223Q9UK11 482 aaPredicted RBP17.8■□□□□ 0.44
PRKCSH-209ENST00000589838 RGS5O15539 181 aa17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 RDH16O75452 317 aa17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 CDRT1O95170 752 aa17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 LIMS3P0CW19 117 aa17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 LIMS4P0CW20 117 aa17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 TYRP1P17643 537 aa17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 GTF2E2P29084 291 aaKnown RBP17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 GABRA5P31644 462 aa17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 ATP6V1E1P36543 226 aa17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 SLC1A3P43003 542 aa17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 GCGRP47871 477 aa17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 SEPHS1P49903 392 aa17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 ZSWIM7Q19AV6 140 aa17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 OR2G6Q5TZ20 316 aa17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 ZNF613Q6PF04 617 aa17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 FIGNL1Q6PIW4 674 aa17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 PARGQ86W56 976 aa17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 CADM3Q8N126 398 aa17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 C19orf47Q8N9M1 422 aaKnown RBP17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 FAM83FQ8NEG4 500 aaPredicted RBP17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 DOK4Q8TEW6 326 aa17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 SLC25A46Q96AG3 418 aa17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 C1GALT1C1Q96EU7 318 aa17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 WDFY2Q96P53 400 aa17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 COQ7Q99807 217 aa17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 JAM3Q9BX67 310 aa17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 MRPS33Q9Y291 106 aaKnown RBP17.79■□□□□ 0.44
PRKCSH-209ENST00000589838 CENPVL1A0A0U1RR11 272 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 A0A1W2PPC4 97 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 PEX12O00623 359 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 SRPX2O60687 465 aaPredicted RBP17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 APOL3O95236 402 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 APOA1P02647 267 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 CT62P0C5K7 136 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 GKN3PP0CG01 181 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 IFI30P13284 250 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 PRG2P13727 222 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 ST6GAL1P15907 406 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 DRD5P21918 477 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 HTR2AP28223 471 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 ACSM1Q08AH1 577 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 ARMC4Q5T2S8 1044 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 MCATQ8IVS2 390 aaKnown RBP17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 OR52N1Q8NH53 320 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 RNF217Q8TC41 542 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 ADAMTS18Q8TE60 1221 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 TRMT61AQ96FX7 289 aaKnown RBP17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 ABHD8Q96I13 439 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 BARHL1Q9BZE3 327 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 OR52D1Q9H346 318 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 STARD5Q9NSY2 213 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 SIDT1Q9NXL6 827 aaKnown RBP17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 KCNE5Q9UJ90 142 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 CBLCQ9ULV8 474 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 NDRG2Q9UN36 371 aaKnown RBP17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 MED31Q9Y3C7 131 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 SLC35F4A4IF30 521 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms