RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 ZNF71Q9NQZ8 489 aaPredicted RBP11.15□□□□□ -0.62
DNMT1-218ENST00000589294 IFT52Q9Y366 437 aa11.15□□□□□ -0.62
DNMT1-218ENST00000589294 M0QX08 132 aa11.14□□□□□ -0.63
DNMT1-218ENST00000589294 GSTA4O15217 222 aa11.14□□□□□ -0.63
DNMT1-218ENST00000589294 GSC2O15499 205 aa11.14□□□□□ -0.63
DNMT1-218ENST00000589294 PEX1O43933 1283 aa11.14□□□□□ -0.63
DNMT1-218ENST00000589294 GMNNO75496 209 aa11.14□□□□□ -0.63
DNMT1-218ENST00000589294 DNAJC8O75937 253 aaPredicted RBP11.14□□□□□ -0.63
DNMT1-218ENST00000589294 IFNA14P01570 189 aa11.14□□□□□ -0.63
DNMT1-218ENST00000589294 THBS1P07996 1170 aa11.14□□□□□ -0.63
DNMT1-218ENST00000589294 IL7RP16871 459 aa11.14□□□□□ -0.63
DNMT1-218ENST00000589294 RPS4Y1P22090 263 aaKnown RBP11.14□□□□□ -0.63
DNMT1-218ENST00000589294 CD97P48960 835 aa11.14□□□□□ -0.63
DNMT1-218ENST00000589294 GAS1P54826 345 aa11.14□□□□□ -0.63
DNMT1-218ENST00000589294 C17orf67Q0P5P2 114 aa11.14□□□□□ -0.63
DNMT1-218ENST00000589294 LARS2Q15031 903 aaKnown RBP11.14□□□□□ -0.63
DNMT1-218ENST00000589294 MAPK14Q16539 360 aa11.14□□□□□ -0.63
DNMT1-218ENST00000589294 FXNQ16595 210 aa11.14□□□□□ -0.63
DNMT1-218ENST00000589294 PLEKHN1Q494U1 663 aaPredicted RBP11.14□□□□□ -0.63
DNMT1-218ENST00000589294 APOOLQ6UXV4 268 aa11.14□□□□□ -0.63
DNMT1-218ENST00000589294 EIF3MQ7L2H7 374 aaKnown RBP11.14□□□□□ -0.63
DNMT1-218ENST00000589294 SULF2Q8IWU5 870 aa11.14□□□□□ -0.63
DNMT1-218ENST00000589294 CMIPQ8IY22 773 aa11.14□□□□□ -0.63
DNMT1-218ENST00000589294 BHLHE22Q8NFJ8 381 aaPredicted RBP11.14□□□□□ -0.63
DNMT1-218ENST00000589294 PNPLA2Q96AD5 504 aa11.14□□□□□ -0.63
DNMT1-218ENST00000589294 UBL7Q96S82 380 aaPredicted RBP11.14□□□□□ -0.63
DNMT1-218ENST00000589294 THTPAQ9BU02 230 aa11.14□□□□□ -0.63
DNMT1-218ENST00000589294 LRMDAQ9H2I8 198 aa11.14□□□□□ -0.63
DNMT1-218ENST00000589294 ARMC7Q9H6L4 198 aa11.14□□□□□ -0.63
DNMT1-218ENST00000589294 PROK2Q9HC23 129 aa11.14□□□□□ -0.63
DNMT1-218ENST00000589294 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.14□□□□□ -0.63
DNMT1-218ENST00000589294 KLRF1Q9NZS2 232 aa11.14□□□□□ -0.63
DNMT1-218ENST00000589294 FLRT3Q9NZU0 649 aa11.14□□□□□ -0.63
DNMT1-218ENST00000589294 KCNE5Q9UJ90 142 aa11.14□□□□□ -0.63
DNMT1-218ENST00000589294 PRDM4Q9UKN5 801 aa11.14□□□□□ -0.63
DNMT1-218ENST00000589294 GPC6Q9Y625 555 aaPredicted RBP11.14□□□□□ -0.63
DNMT1-218ENST00000589294 PRRC2CQ9Y520 2896 aaKnown RBP11.14□□□□□ -0.63
DNMT1-218ENST00000589294 IGLV3-32A0A0A0MS00 114 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 SERINC4A6NH21 518 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 NDUFB5O43674 189 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 TRIM3O75382 744 aaPredicted RBP11.13□□□□□ -0.63
DNMT1-218ENST00000589294 GCM2O75603 506 aaPredicted RBP11.13□□□□□ -0.63
DNMT1-218ENST00000589294 ANGPTL1O95841 491 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 ME2P23368 584 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 MSX1P28360 303 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 KDELR2P33947 212 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 PGM1P36871 562 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 PTGDSP41222 190 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 KCNJ2P63252 427 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 KCNJ10P78508 379 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 CEACAM7Q14002 265 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 ELOAQ14241 798 aaKnown RBP11.13□□□□□ -0.63
DNMT1-218ENST00000589294 PDZK1Q5T2W1 519 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 PGM2L1Q6PCE3 622 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 PCSK4Q6UW60 755 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 OLIG3Q7RTU3 272 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 GALNTL5Q7Z4T8 443 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 MARCH3Q86UD3 253 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 PTRH1Q86Y79 214 aaKnown RBP11.13□□□□□ -0.63
DNMT1-218ENST00000589294 RNF148Q8N7C7 305 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 TEX19Q8NA77 164 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 FAM98AQ8NCA5 519 aaKnown RBP11.13□□□□□ -0.63
DNMT1-218ENST00000589294 OR2M7Q8NG81 312 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 OR52P1PQ8NH57 321 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 DUSP19Q8WTR2 217 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 RASSF5Q8WWW0 418 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 TMEM41AQ96HV5 264 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 DOHHQ9BU89 302 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 OSBPL11Q9BXB4 747 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 EVA1AQ9H8M9 152 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 GORASP2Q9H8Y8 452 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 ZFP64Q9NPA5 681 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 KLHL1Q9NR64 748 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 LHX6Q9UPM6 363 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 USP22Q9UPT9 525 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 SLC35A3Q9Y2D2 325 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 CSAG2Q9Y5P2 127 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.13□□□□□ -0.63
DNMT1-218ENST00000589294 IGSF10Q6WRI0 2623 aa11.13□□□□□ -0.63
DNMT1-218ENST00000589294 BOD1L1Q8NFC6 3051 aa11.12□□□□□ -0.63
DNMT1-218ENST00000589294 NPIPA5A0A0B4J1W7 369 aa11.12□□□□□ -0.63
DNMT1-218ENST00000589294 NPIPA7E9PJI5 369 aa11.12□□□□□ -0.63
DNMT1-218ENST00000589294 GTPBP1O00178 669 aaKnown RBP11.12□□□□□ -0.63
DNMT1-218ENST00000589294 CXCR6O00574 342 aa11.12□□□□□ -0.63
DNMT1-218ENST00000589294 ADAM10O14672 748 aa11.12□□□□□ -0.63
DNMT1-218ENST00000589294 EIF4E2O60573 245 aaKnown RBP11.12□□□□□ -0.63
DNMT1-218ENST00000589294 MFN2O95140 757 aa11.12□□□□□ -0.63
DNMT1-218ENST00000589294 PABPC4LP0CB38 370 aaKnown RBP11.12□□□□□ -0.63
DNMT1-218ENST00000589294 NPIPA8P0DM63 369 aa11.12□□□□□ -0.63
DNMT1-218ENST00000589294 NID1P14543 1247 aa11.12□□□□□ -0.63
DNMT1-218ENST00000589294 GGT1P19440 569 aa11.12□□□□□ -0.63
DNMT1-218ENST00000589294 ELAVL4P26378 380 aaKnown RBP11.12□□□□□ -0.63
DNMT1-218ENST00000589294 PRKAR1BP31321 381 aa11.12□□□□□ -0.63
DNMT1-218ENST00000589294 NCALDP61601 193 aa11.12□□□□□ -0.63
DNMT1-218ENST00000589294 KLRB1Q12918 225 aa11.12□□□□□ -0.63
DNMT1-218ENST00000589294 BNIP2Q12982 314 aa11.12□□□□□ -0.63
DNMT1-218ENST00000589294 TRIM25Q14258 630 aaKnown RBP11.12□□□□□ -0.63
DNMT1-218ENST00000589294 FGFBP1Q14512 234 aa11.12□□□□□ -0.63
DNMT1-218ENST00000589294 INAQ16352 499 aa11.12□□□□□ -0.63
DNMT1-218ENST00000589294 HYAL4Q2M3T9 481 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms