RNA–Protein interactions for RNA: ENST00000587228.5

GPATCH8-205, Transcript of G-patch domain containing 8, humanhuman

TSL 1 (best)

Gene GPATCH8, Length 4,713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-205ENST00000587228 SACM1LQ9NTJ5 587 aa9.13□□□□□ -0.95
GPATCH8-205ENST00000587228 EXTL2Q9UBQ6 330 aa9.13□□□□□ -0.95
GPATCH8-205ENST00000587228 TLCD2A6NGC4 264 aa9.13□□□□□ -0.95
GPATCH8-205ENST00000587228 ARNTLO00327 626 aa9.13□□□□□ -0.95
GPATCH8-205ENST00000587228 T-ENOLP0DO92 83 aa9.13□□□□□ -0.95
GPATCH8-205ENST00000587228 TCN2P20062 427 aa9.13□□□□□ -0.95
GPATCH8-205ENST00000587228 POU3F2P20265 443 aaPredicted RBP9.13□□□□□ -0.95
GPATCH8-205ENST00000587228 SOX3P41225 446 aa9.13□□□□□ -0.95
GPATCH8-205ENST00000587228 RAB2AP61019 212 aa9.13□□□□□ -0.95
GPATCH8-205ENST00000587228 SPRED3Q2MJR0 410 aa9.13□□□□□ -0.95
GPATCH8-205ENST00000587228 TMEM196Q5HYL7 178 aa9.13□□□□□ -0.95
GPATCH8-205ENST00000587228 SERPINA11Q86U17 422 aa9.13□□□□□ -0.95
GPATCH8-205ENST00000587228 ZNF595Q8IYB9 648 aa9.13□□□□□ -0.95
GPATCH8-205ENST00000587228 GOLM1Q8NBJ4 401 aa9.13□□□□□ -0.95
GPATCH8-205ENST00000587228 C15orf40Q8WUR7 153 aa9.13□□□□□ -0.95
GPATCH8-205ENST00000587228 CCDC107Q8WV48 283 aa9.13□□□□□ -0.95
GPATCH8-205ENST00000587228 TM9SF4Q92544 642 aa9.13□□□□□ -0.95
GPATCH8-205ENST00000587228 SLC30A2Q9BRI3 323 aa9.13□□□□□ -0.95
GPATCH8-205ENST00000587228 ATG5Q9H1Y0 275 aa9.13□□□□□ -0.95
GPATCH8-205ENST00000587228 DCAF13Q9NV06 445 aaKnown RBP9.13□□□□□ -0.95
GPATCH8-205ENST00000587228 FBXO9Q9UK97 447 aaPredicted RBP9.13□□□□□ -0.95
GPATCH8-205ENST00000587228 ITGB1BP2Q9UKP3 347 aa9.13□□□□□ -0.95
GPATCH8-205ENST00000587228 MCTS1Q9ULC4 181 aaKnown RBP9.13□□□□□ -0.95
GPATCH8-205ENST00000587228 MAGED1Q9Y5V3 778 aaPredicted RBP9.13□□□□□ -0.95
GPATCH8-205ENST00000587228 CNOT1A5YKK6 2376 aaKnown RBP9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 C13orf42A0A1B0GVH6 325 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 SH3D21A4FU49 640 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 C12orf71A8MTZ7 269 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 SLCO2B1O94956 709 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 IFNA21P01568 189 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 MMP2P08253 660 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 PABPC4LP0CB38 370 aaKnown RBP9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 NPPBP16860 134 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 MSX1P28360 303 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 RAB38P57729 211 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 PPP2CBP62714 309 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 PPP2CAP67775 309 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 C14orf28Q4W4Y0 310 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 PIP5KL1Q5T9C9 394 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 AFMIDQ63HM1 303 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 SLC18B1Q6NT16 456 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 Q6ZS52 159 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 Q6ZSR9 355 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 SPNS2Q8IVW8 549 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 TMEM151AQ8N4L1 468 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 ANKK1Q8NFD2 765 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 CCL4L1Q8NHW4 92 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 NPRL2Q8WTW4 380 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 BPIFA2Q96DR5 249 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 FOXN4Q96NZ1 517 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 TREX2Q9BQ50 279 aaPredicted RBP9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 CDH20Q9HBT6 801 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 SH2B3Q9UQQ2 575 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 SLC35A3Q9Y2D2 325 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 N4BP2Q86UW6 1770 aaPredicted RBP9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 TEX13CA0A0J9YWL9 993 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 TVP23AA6NH52 213 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 L7N2F9 121 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 SLC1A7O00341 560 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 FOXE1O00358 373 aaPredicted RBP9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 CASC3O15234 703 aaKnown RBP9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 GYPBP06028 91 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 CD63P08962 238 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 FBXO45P0C2W1 286 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 ZNF35P13682 527 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 VAMP2P63027 116 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 SQSTM1Q13501 440 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 TUBA3CQ13748 450 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 RAB39AQ14964 217 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 C9orf135Q5VTT2 229 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 METRNLQ641Q3 311 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 CGB2Q6NT52 195 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 UNQ6126/PRO20091Q6UXV3 157 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 ZNF367Q7RTV3 350 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 TSPYL5Q86VY4 417 aaPredicted RBP9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 LSMEM2Q8N112 164 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 DUSP19Q8WTR2 217 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 TESCQ96BS2 214 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 NEDD4LQ96PU5 975 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 SLC29A1Q99808 456 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 BTBD2Q9BX70 525 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 TUBA8Q9NY65 449 aaPredicted RBP9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 TMEM181Q9P2C4 612 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 NUFIP1Q9UHK0 495 aaKnown RBP9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 NOP16Q9Y3C1 178 aaKnown RBP9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 KRBA1A5PL33 1030 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 IGLV3-25P01717 112 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 SLC19A1P41440 591 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 MAGEA12P43365 314 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 PRPS1P60891 318 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 CSNK1G2P78368 415 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 TNFRSF17Q02223 184 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 TMEM201Q5SNT2 666 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 CLEC14AQ86T13 490 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 FAM217AQ8IXS0 508 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 OR13C3Q8NGS6 347 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 MS4A8Q9BY19 250 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 SEMA6CQ9H3T2 930 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 EPHX3Q9H6B9 360 aa9.12□□□□□ -0.95
GPATCH8-205ENST00000587228 ACSS1Q9NUB1 689 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms