RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 ING2Q9H160 280 aa16.46■□□□□ 0.23
RBFOX1-222ENST00000585867 Q9H521 79 aa16.46■□□□□ 0.23
RBFOX1-222ENST00000585867 ZNF443Q9Y2A4 671 aaPredicted RBP16.46■□□□□ 0.23
RBFOX1-222ENST00000585867 DTX4Q9Y2E6 619 aa16.46■□□□□ 0.23
RBFOX1-222ENST00000585867 SAMHD1Q9Y3Z3 626 aaKnown RBP16.46■□□□□ 0.23
RBFOX1-222ENST00000585867 C2orf92A0A1B0GVN3 265 aa16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 ACOX3O15254 700 aa16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 ZIC2O95409 532 aaPredicted RBP16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 HPRP00739 348 aa16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 IL7RP16871 459 aa16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 TNFRSF1BP20333 461 aa16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 FPR1P21462 350 aa16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 CHAF1BQ13112 559 aa16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 AIMP2Q13155 320 aaKnown RBP16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 GPR68Q15743 365 aa16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 DECR1Q16698 335 aa16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 IQCCQ4KMZ1 466 aa16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 FLYWCH1Q4VC44 716 aa16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 FIGNL1Q6PIW4 674 aa16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 NPSR1Q6W5P4 371 aa16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 OLIG3Q7RTU3 272 aa16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 GALNT4Q8N4A0 578 aa16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 C17orf47Q8NEP4 570 aa16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 ELP5Q8TE02 316 aa16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 LCORQ96JN0 433 aaPredicted RBP16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 ZNF597Q96LX8 424 aa16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 SEMA4CQ9C0C4 833 aa16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 MMP25Q9NPA2 562 aa16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 ZNF223Q9UK11 482 aaPredicted RBP16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 PCDHGA10Q9Y5H3 936 aa16.45■□□□□ 0.22
RBFOX1-222ENST00000585867 SOCS2O14508 198 aa16.44■□□□□ 0.22
RBFOX1-222ENST00000585867 SERPINA7P05543 415 aa16.44■□□□□ 0.22
RBFOX1-222ENST00000585867 LCN1P31025 176 aa16.44■□□□□ 0.22
RBFOX1-222ENST00000585867 SMIM11AP58511 58 aa16.44■□□□□ 0.22
RBFOX1-222ENST00000585867 SPIBQ01892 262 aa16.44■□□□□ 0.22
RBFOX1-222ENST00000585867 EBPQ15125 230 aaKnown RBP16.44■□□□□ 0.22
RBFOX1-222ENST00000585867 THOC3Q96J01 351 aaKnown RBP16.44■□□□□ 0.22
RBFOX1-222ENST00000585867 RBM4BQ9BQ04 359 aaKnown RBP16.44■□□□□ 0.22
RBFOX1-222ENST00000585867 RBM4Q9BWF3 364 aaKnown RBP16.44■□□□□ 0.22
RBFOX1-222ENST00000585867 QRSL1Q9H0R6 528 aaKnown RBP16.44■□□□□ 0.22
RBFOX1-222ENST00000585867 RAB26Q9ULW5 256 aa16.44■□□□□ 0.22
RBFOX1-222ENST00000585867 KCNMB2Q9Y691 235 aa16.44■□□□□ 0.22
RBFOX1-222ENST00000585867 CHD8Q9HCK8 2581 aa16.44■□□□□ 0.22
RBFOX1-222ENST00000585867 TRBV11-1A0A0K0K1C0 115 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 PDLIM1O00151 329 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 EI24O14681 340 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 DIRAS1O95057 198 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 ITGAMP11215 1152 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 NID1P14543 1247 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 ITGA3P26006 1051 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 RRM2P31350 389 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 DCTP40126 519 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 ALDH3A2P51648 485 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 DAG1Q14118 895 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 NRF1Q16656 503 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 RNF220Q5VTB9 566 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 STK32CQ86UX6 486 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 VRK2Q86Y07 508 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 BCORP1Q8N888 145 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 SNRNP27Q8WVK2 155 aaKnown RBP16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 ADIPOR1Q96A54 375 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 HSPBAP1Q96EW2 488 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 GAL3ST4Q96RP7 486 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 ARHGDIGQ99819 225 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 HOXD1Q9GZZ0 328 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 GABARAPL1Q9H0R8 117 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 ASPMQ8IZT6 3477 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 IFNA8P32881 189 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 CCL11P51671 97 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 HSDL2Q6YN16 418 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 APLFQ8IW19 511 aaPredicted RBP16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 C9orf40Q8IXQ3 194 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 GALNT16Q8N428 558 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 VANGL1Q8TAA9 524 aaPredicted RBP16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 RDH12Q96NR8 316 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 SLC29A1Q99808 456 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 OSBPL11Q9BXB4 747 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 DEFB126Q9BYW3 111 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 WWTR1Q9GZV5 400 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 USE1Q9NZ43 259 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 LRCH1Q9Y2L9 728 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 TESMINQ9Y4I5 508 aa16.43■□□□□ 0.22
RBFOX1-222ENST00000585867 PRAMEF25A6NGN4 478 aa16.42■□□□□ 0.22
RBFOX1-222ENST00000585867 A6NL46 340 aa16.42■□□□□ 0.22
RBFOX1-222ENST00000585867 TNFRSF11BO00300 401 aa16.42■□□□□ 0.22
RBFOX1-222ENST00000585867 TO15178 435 aa16.42■□□□□ 0.22
RBFOX1-222ENST00000585867 ZFAND5O76080 213 aa16.42■□□□□ 0.22
RBFOX1-222ENST00000585867 IL33O95760 270 aa16.42■□□□□ 0.22
RBFOX1-222ENST00000585867 UQCRBP14927 111 aa16.42■□□□□ 0.22
RBFOX1-222ENST00000585867 KRT20P35900 424 aa16.42■□□□□ 0.22
RBFOX1-222ENST00000585867 RFX3P48380 749 aa16.42■□□□□ 0.22
RBFOX1-222ENST00000585867 SOX8P57073 446 aa16.42■□□□□ 0.22
RBFOX1-222ENST00000585867 EEF1A1P68104 462 aaKnown RBP16.42■□□□□ 0.22
RBFOX1-222ENST00000585867 RNF4P78317 190 aa16.42■□□□□ 0.22
RBFOX1-222ENST00000585867 EPS8Q12929 822 aa16.42■□□□□ 0.22
RBFOX1-222ENST00000585867 NNATQ16517 81 aa16.42■□□□□ 0.22
RBFOX1-222ENST00000585867 OTUD3Q5T2D3 398 aaPredicted RBP16.42■□□□□ 0.22
RBFOX1-222ENST00000585867 WLSQ5T9L3 541 aa16.42■□□□□ 0.22
RBFOX1-222ENST00000585867 DEF8Q6ZN54 512 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms