RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 MRPS18CQ9Y3D5 142 aaKnown RBP16.93■□□□□ 0.3
PPP4R1-215ENST00000580182 PCDHGB3Q9Y5G1 929 aa16.93■□□□□ 0.3
PPP4R1-215ENST00000580182 UQCRHLA0A096LP55 91 aa16.92■□□□□ 0.3
PPP4R1-215ENST00000580182 IGLV3-32A0A0A0MS00 114 aa16.92■□□□□ 0.3
PPP4R1-215ENST00000580182 CCDC154A6NI56 674 aa16.92■□□□□ 0.3
PPP4R1-215ENST00000580182 POLR3GO15318 223 aaPredicted RBP16.92■□□□□ 0.3
PPP4R1-215ENST00000580182 NDUFB5O43674 189 aa16.92■□□□□ 0.3
PPP4R1-215ENST00000580182 ACTL6AO96019 429 aa16.92■□□□□ 0.3
PPP4R1-215ENST00000580182 NGFRP08138 427 aa16.92■□□□□ 0.3
PPP4R1-215ENST00000580182 OR12D1P0DN82 309 aa16.92■□□□□ 0.3
PPP4R1-215ENST00000580182 HK1P19367 917 aa16.92■□□□□ 0.3
PPP4R1-215ENST00000580182 ATP6V1C1P21283 382 aa16.92■□□□□ 0.3
PPP4R1-215ENST00000580182 HTR1EP28566 365 aa16.92■□□□□ 0.3
PPP4R1-215ENST00000580182 DCTP40126 519 aa16.92■□□□□ 0.3
PPP4R1-215ENST00000580182 B3GALT5-AS1P59052 145 aa16.92■□□□□ 0.3
PPP4R1-215ENST00000580182 ACSF3Q4G176 576 aaPredicted RBP16.92■□□□□ 0.3
PPP4R1-215ENST00000580182 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.92■□□□□ 0.3
PPP4R1-215ENST00000580182 SP5Q6BEB4 398 aaPredicted RBP16.92■□□□□ 0.3
PPP4R1-215ENST00000580182 TNFAIP8L2Q6P589 184 aaPredicted RBP16.92■□□□□ 0.3
PPP4R1-215ENST00000580182 RAB8BQ92930 207 aa16.92■□□□□ 0.3
PPP4R1-215ENST00000580182 C1GALT1C1Q96EU7 318 aa16.92■□□□□ 0.3
PPP4R1-215ENST00000580182 SFXN2Q96NB2 322 aa16.92■□□□□ 0.3
PPP4R1-215ENST00000580182 SDF2Q99470 211 aa16.92■□□□□ 0.3
PPP4R1-215ENST00000580182 SLC6A13Q9NSD5 602 aa16.92■□□□□ 0.3
PPP4R1-215ENST00000580182 COQ3Q9NZJ6 369 aa16.92■□□□□ 0.3
PPP4R1-215ENST00000580182 KLF2Q9Y5W3 355 aaPredicted RBP16.92■□□□□ 0.3
PPP4R1-215ENST00000580182 KIAA1549Q9HCM3 1950 aa16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 A0A0G2JNJ9 132 aa16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 AHRRA9YTQ3 701 aa16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 SHISA8B8ZZ34 492 aa16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 C19orf84I3L1E1 186 aa16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 SCDO00767 359 aa16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 TOXO94900 526 aa16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 IL6P05231 212 aa16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 HPGDP15428 266 aa16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 LCN1P31025 176 aa16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 CHI3L1P36222 383 aaPredicted RBP16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 LHX2P50458 406 aa16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 SRYQ05066 204 aa16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 FLYWCH1Q4VC44 716 aa16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 ARSKQ6UWY0 536 aa16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 ZNF621Q6ZSS3 439 aa16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 PM20D2Q8IYS1 436 aa16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 MIER2Q8N344 545 aa16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 CHDHQ8NE62 594 aaPredicted RBP16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 MIPOL1Q8TD10 442 aa16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 CA5BP1Q8WTZ4 195 aa16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 VPS33AQ96AX1 596 aa16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 NEURL3Q96EH8 262 aa16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 SH3YL1Q96HL8 342 aaPredicted RBP16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 UCK2Q9BZX2 261 aa16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 PTGES2Q9H7Z7 377 aa16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 Q9UFV3 132 aa16.91■□□□□ 0.3
PPP4R1-215ENST00000580182 OIP5O43482 229 aa16.9■□□□□ 0.3
PPP4R1-215ENST00000580182 FCMRO60667 390 aa16.9■□□□□ 0.3
PPP4R1-215ENST00000580182 SOX30O94993 753 aa16.9■□□□□ 0.3
PPP4R1-215ENST00000580182 HOXD4P09016 255 aaPredicted RBP16.9■□□□□ 0.3
PPP4R1-215ENST00000580182 GCKP35557 465 aa16.9■□□□□ 0.3
PPP4R1-215ENST00000580182 POLR2JP52435 117 aaKnown RBP16.9■□□□□ 0.3
PPP4R1-215ENST00000580182 ZNF630Q2M218 657 aaPredicted RBP16.9■□□□□ 0.3
PPP4R1-215ENST00000580182 TIGD2Q4W5G0 525 aa16.9■□□□□ 0.3
PPP4R1-215ENST00000580182 RAET1LQ5VY80 246 aa16.9■□□□□ 0.3
PPP4R1-215ENST00000580182 PLXDC2Q6UX71 529 aa16.9■□□□□ 0.3
PPP4R1-215ENST00000580182 DNAJC14Q6Y2X3 702 aaPredicted RBP16.9■□□□□ 0.3
PPP4R1-215ENST00000580182 RNF130Q86XS8 419 aa16.9■□□□□ 0.3
PPP4R1-215ENST00000580182 XAGE5Q8WWM1 108 aa16.9■□□□□ 0.3
PPP4R1-215ENST00000580182 TRIB1Q96RU8 372 aa16.9■□□□□ 0.3
PPP4R1-215ENST00000580182 NPAS1Q99742 590 aa16.9■□□□□ 0.3
PPP4R1-215ENST00000580182 CCDC28BQ9BUN5 200 aa16.9■□□□□ 0.3
PPP4R1-215ENST00000580182 CENPVL1A0A0U1RR11 272 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 A0A1W2PQD3 144 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 PRAMEF27A3QJZ7 478 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 NKX2-6A6NCS4 301 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 DUXAA6NLW8 204 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 FAM90A27PA6NNH2 459 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 NPIPB9F8W1W9 429 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 RFXANKO14593 260 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 EDF1O60869 148 aaKnown RBP16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 EPPINO95925 133 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 CPN1P15169 458 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 CD1EP15812 388 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 CHMP24386 653 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 CHRNB4P30926 498 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 PTGER4P35408 488 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 ATP12AP54707 1039 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 CLDN18P56856 261 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 FUT5Q11128 374 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 GANABQ14697 944 aaKnown RBP16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 GPR68Q15743 365 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 ARHGAP11BQ3KRB8 267 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 KLHL26Q53HC5 615 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 HEPHL1Q6MZM0 1159 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 AAGABQ6PD74 315 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 ENPP6Q6UWR7 440 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 LIX1LQ8IVB5 337 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 NAXEQ8NCW5 288 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 TNIP2Q8NFZ5 429 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 RFWD2Q8NHY2 731 aa16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 PNPT1Q8TCS8 783 aaKnown RBP16.89■□□□□ 0.29
PPP4R1-215ENST00000580182 PHOSPHO1Q8TCT1 267 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms