RNA–Protein interactions for RNA: ENST00000578397.5

PSMD11-207, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 1,178 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-207ENST00000578397 MED13LQ71F56 2210 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 A0A1W2PRB8 838 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 SH3D21A4FU49 640 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 H3BML4 177 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 CASKO14936 926 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 SCAMP2O15127 329 aaKnown RBP12.56□□□□□ -0.4
PSMD11-207ENST00000578397 NDUFB5O43674 189 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 SOX30O94993 753 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 KCNK2O95069 426 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 OXSR1O95747 527 aaPredicted RBP12.56□□□□□ -0.4
PSMD11-207ENST00000578397 BPGMP07738 259 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 SUCLG1P53597 346 aaKnown RBP12.56□□□□□ -0.4
PSMD11-207ENST00000578397 DUSP5Q16690 384 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 ATP6AP1LQ52LC2 224 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 EXOSC6Q5RKV6 272 aaKnown RBP12.56□□□□□ -0.4
PSMD11-207ENST00000578397 WDR93Q6P2C0 686 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 ZCCHC23Q6ZST2 131 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 CAMKMTQ7Z624 323 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 MISPQ8IVT2 679 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 METTL25Q8N6Q8 603 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 COX18Q8N8Q8 333 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 OR5M1Q8NGP8 315 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 ACTRT2Q8TDY3 377 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 OR5P2Q8WZ92 322 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 FIG4Q92562 907 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 MBD6Q96DN6 1003 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 FAM120BQ96EK7 910 aaKnown RBP12.56□□□□□ -0.4
PSMD11-207ENST00000578397 PRPF18Q99633 342 aaKnown RBP12.56□□□□□ -0.4
PSMD11-207ENST00000578397 TMEM109Q9BVC6 243 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 PINK1Q9BXM7 581 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 RNF122Q9H9V4 155 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 UBQLN4Q9NRR5 601 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 DUSP22Q9NRW4 184 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 SIRT3Q9NTG7 399 aaPredicted RBP12.56□□□□□ -0.4
PSMD11-207ENST00000578397 ZCCHC3Q9NUD5 404 aaKnown RBP12.56□□□□□ -0.4
PSMD11-207ENST00000578397 ATAD3AQ9NVI7 634 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 GIN1Q9NXP7 522 aa12.56□□□□□ -0.4
PSMD11-207ENST00000578397 ITPR3Q14573 2671 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 PRRC2AP48634 2157 aaKnown RBP12.55□□□□□ -0.4
PSMD11-207ENST00000578397 A0A1W2PQD3 144 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 C7orf72A4D263 438 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 H0YC42 278 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 SEC14L5O43304 696 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 PEX11AO75192 247 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 SLU7O95391 586 aaKnown RBP12.55□□□□□ -0.4
PSMD11-207ENST00000578397 FCGR2AP12318 317 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 HPGDP15428 266 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 ZNF17P17021 662 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 KIR2DL2P43627 348 aaPredicted RBP12.55□□□□□ -0.4
PSMD11-207ENST00000578397 TPD52P55327 224 aaPredicted RBP12.55□□□□□ -0.4
PSMD11-207ENST00000578397 CLDN20P56880 219 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 C6orf136Q5SQH8 315 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 CPTPQ5TA50 214 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 FIGNL1Q6PIW4 674 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 PAMR1Q6UXH9 720 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 GTPBP8Q8N3Z3 284 aaPredicted RBP12.55□□□□□ -0.4
PSMD11-207ENST00000578397 CNEP1R1Q8N9A8 125 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 OR7A2PQ8NGA2 310 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 PSMA8Q8TAA3 256 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 AGR3Q8TD06 166 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 SMPDL3BQ92485 455 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 COQ8BQ96D53 544 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 C16orf58Q96GQ5 468 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 ALPK1Q96QP1 1244 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 STACQ99469 402 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 BTBD2Q9BX70 525 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 PIGUQ9H490 435 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 PAQR5Q9NXK6 330 aaPredicted RBP12.55□□□□□ -0.4
PSMD11-207ENST00000578397 ELOVL5Q9NYP7 299 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 ZDHHC2Q9UIJ5 367 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 PLEKHA6Q9Y2H5 1048 aa12.55□□□□□ -0.4
PSMD11-207ENST00000578397 SCDO00767 359 aa12.54□□□□□ -0.4
PSMD11-207ENST00000578397 TYROBPO43914 113 aa12.54□□□□□ -0.4
PSMD11-207ENST00000578397 SMNDC1O75940 238 aaKnown RBP eCLIP12.54□□□□□ -0.4
PSMD11-207ENST00000578397 RAF1P04049 648 aa12.54□□□□□ -0.4
PSMD11-207ENST00000578397 HRGP04196 525 aa12.54□□□□□ -0.4
PSMD11-207ENST00000578397 HMGN2P05204 90 aaKnown RBP12.54□□□□□ -0.4
PSMD11-207ENST00000578397 KRT16P08779 473 aa12.54□□□□□ -0.4
PSMD11-207ENST00000578397 CD8BP10966 210 aa12.54□□□□□ -0.4
PSMD11-207ENST00000578397 LAMP1P11279 417 aa12.54□□□□□ -0.4
PSMD11-207ENST00000578397 EFNA1P20827 205 aaPredicted RBP12.54□□□□□ -0.4
PSMD11-207ENST00000578397 PRPS1L1P21108 318 aa12.54□□□□□ -0.4
PSMD11-207ENST00000578397 ARRB2P32121 409 aa12.54□□□□□ -0.4
PSMD11-207ENST00000578397 CPOXP36551 454 aa12.54□□□□□ -0.4
PSMD11-207ENST00000578397 CD79BP40259 229 aa12.54□□□□□ -0.4
PSMD11-207ENST00000578397 ETV4P43268 484 aa12.54□□□□□ -0.4
PSMD11-207ENST00000578397 POU6F2P78424 691 aaPredicted RBP12.54□□□□□ -0.4
PSMD11-207ENST00000578397 LASP1Q14847 261 aaKnown RBP12.54□□□□□ -0.4
PSMD11-207ENST00000578397 PON3Q15166 354 aa12.54□□□□□ -0.4
PSMD11-207ENST00000578397 SGCBQ16585 318 aa12.54□□□□□ -0.4
PSMD11-207ENST00000578397 LSM12Q3MHD2 195 aaKnown RBP12.54□□□□□ -0.4
PSMD11-207ENST00000578397 IL23RQ5VWK5 629 aa12.54□□□□□ -0.4
PSMD11-207ENST00000578397 CDC73Q6P1J9 531 aa12.54□□□□□ -0.4
PSMD11-207ENST00000578397 BTLAQ7Z6A9 289 aa12.54□□□□□ -0.4
PSMD11-207ENST00000578397 GALNT10Q86SR1 603 aa12.54□□□□□ -0.4
PSMD11-207ENST00000578397 MED12LQ86YW9 2145 aa12.54□□□□□ -0.4
PSMD11-207ENST00000578397 TGIF2LYQ8IUE0 185 aa12.54□□□□□ -0.4
PSMD11-207ENST00000578397 NUDCD3Q8IVD9 361 aa12.54□□□□□ -0.4
PSMD11-207ENST00000578397 WDR75Q8IWA0 830 aaKnown RBP12.54□□□□□ -0.4
PSMD11-207ENST00000578397 FNDC5Q8NAU1 212 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms