RNA–Protein interactions for RNA: ENST00000577978.1

DDX42-205, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 581 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-205ENST00000577978 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.36□□□□□ -1.87
DDX42-205ENST00000577978 REG4Q9BYZ8 158 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 CCDC90BQ9GZT6 254 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 PIGUQ9H490 435 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 RHOJQ9H4E5 214 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 C6orf106Q9H6K1 298 aaPredicted RBP3.36□□□□□ -1.87
DDX42-205ENST00000577978 GAREM1Q9H706 876 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 NT5DC2Q9H857 520 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 FOLH1BQ9HBA9 442 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 APOBEC3GQ9HC16 384 aaKnown RBP3.36□□□□□ -1.87
DDX42-205ENST00000577978 ZBTB20Q9HC78 741 aaPredicted RBP3.36□□□□□ -1.87
DDX42-205ENST00000577978 PNRC2Q9NPJ4 139 aaKnown RBP3.36□□□□□ -1.87
DDX42-205ENST00000577978 ENTPD7Q9NQZ7 604 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 SDR39U1Q9NRG7 319 aaPredicted RBP3.36□□□□□ -1.87
DDX42-205ENST00000577978 SDHAF3Q9NRP4 125 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 OLA1Q9NTK5 396 aaKnown RBP3.36□□□□□ -1.87
DDX42-205ENST00000577978 ERAP1Q9NZ08 941 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 ZNF224Q9NZL3 707 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 NDRG3Q9UGV2 375 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 UBQLN2Q9UHD9 624 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 CDH9Q9ULB4 789 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 TBX20Q9UMR3 447 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 DUSP12Q9UNI6 340 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 ING4Q9UNL4 249 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 RUVBL2Q9Y230 463 aaKnown RBP3.36□□□□□ -1.87
DDX42-205ENST00000577978 GINS2Q9Y248 185 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 KLHL20Q9Y2M5 609 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 HSPB11Q9Y547 144 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 ORC6Q9Y5N6 252 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 INSL5Q9Y5Q6 135 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 SNX8Q9Y5X2 465 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 PSAT1Q9Y617 370 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 STYXL1Q9Y6J8 313 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 USP9YO00507 2555 aaPredicted RBP3.36□□□□□ -1.87
DDX42-205ENST00000577978 COL1A2P08123 1366 aa3.36□□□□□ -1.87
DDX42-205ENST00000577978 ZFC3H1O60293 1989 aaKnown RBP3.35□□□□□ -1.87
DDX42-205ENST00000577978 ZCWPW2A0A1B0GU75 182 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 A0A1W2PQ09 198 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 CLEC18AA5D8T8 446 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 OR6C75A6NL08 312 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 ERI2A8K979 691 aaKnown RBP3.35□□□□□ -1.87
DDX42-205ENST00000577978 PRSS47A8MTI9 375 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 C2CD4DB7Z1M9 353 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 PTGES3LE9PB15 166 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 C5orf67F2Z3F1 127 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 K7ERI5 159 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 SPRY3O43610 288 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 XPNPEP2O43895 674 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 ORC5O43913 435 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 SSX5O60225 188 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 DUSP11O75319 330 aaKnown RBP3.35□□□□□ -1.87
DDX42-205ENST00000577978 RPP40O75818 363 aaKnown RBP3.35□□□□□ -1.87
DDX42-205ENST00000577978 SOX30O94993 753 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 SCELO95171 688 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 FADS2O95864 444 aaKnown RBP3.35□□□□□ -1.87
DDX42-205ENST00000577978 LALBAP00709 142 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 CALCAP01258 141 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 CSF3P09919 207 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 OR56A5P0C7T3 313 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 SLC35E2BP0CK96 405 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 SMIM6P0DI80 62 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 SFTPCP11686 197 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 SRCP12931 536 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 IFI30P13284 250 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 DARSP14868 501 aaKnown RBP3.35□□□□□ -1.87
DDX42-205ENST00000577978 ARSBP15848 533 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 ZNF3P17036 446 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 MAGP20916 626 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 GADD45AP24522 165 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 PSMA3P25788 255 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 ELAVL4P26378 380 aaKnown RBP3.35□□□□□ -1.87
DDX42-205ENST00000577978 CALCRP30988 508 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 HOXA6P31267 233 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 HNF1BP35680 557 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 NUP62P37198 522 aaPredicted RBP3.35□□□□□ -1.87
DDX42-205ENST00000577978 DCTP40126 519 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 MAGEA2P43356 314 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 CLCN3P51790 818 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 ATP12AP54707 1039 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 PSMD4P55036 377 aaKnown RBP3.35□□□□□ -1.87
DDX42-205ENST00000577978 CDH6P55285 790 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 RAB14P61106 215 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 PSPHP78330 225 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 RPP38P78345 283 aaKnown RBP3.35□□□□□ -1.87
DDX42-205ENST00000577978 IL5RAQ01344 420 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 IL1RL1Q01638 556 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 HSF2Q03933 536 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 CRYZQ08257 329 aaKnown RBP3.35□□□□□ -1.87
DDX42-205ENST00000577978 Q0VFX4 171 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 MRPL28Q13084 256 aaKnown RBP3.35□□□□□ -1.87
DDX42-205ENST00000577978 RAPSNQ13702 412 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 MAD2L1BPQ15013 274 aaPredicted RBP3.35□□□□□ -1.87
DDX42-205ENST00000577978 SHBQ15464 509 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 ZNF79Q15937 498 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 TATDN3Q17R31 274 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 TIGD6Q17RP2 521 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 MICBQ29980 383 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 PTPN20Q4JDL3 420 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 TEX30Q5JUR7 227 aa3.35□□□□□ -1.87
DDX42-205ENST00000577978 ENTPD8Q5MY95 495 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms