RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 HILS1P60008 231 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 RPS3AP61247 264 aaKnown RBP6.29□□□□□ -1.4
SMG6-205ENST00000570659 RAE1P78406 368 aaKnown RBP6.29□□□□□ -1.4
SMG6-205ENST00000570659 FOXF1Q12946 379 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 CUL3Q13618 768 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 TRADDQ15628 312 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 CD226Q15762 336 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 ZKSCAN8Q15776 578 aaPredicted RBP6.29□□□□□ -1.4
SMG6-205ENST00000570659 PDCD2Q16342 344 aaPredicted RBP6.29□□□□□ -1.4
SMG6-205ENST00000570659 HIST2H2ACQ16777 129 aaPredicted RBP6.29□□□□□ -1.4
SMG6-205ENST00000570659 MSMPQ1L6U9 139 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 NDUFAF6Q330K2 333 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 SGO1Q5FBB7 561 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 HBMQ6B0K9 141 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 HIST2H2AA3Q6FI13 130 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 COMMD6Q7Z4G1 85 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 GOLGA7Q7Z5G4 137 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 C1QL4Q86Z23 238 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 RELL1Q8IUW5 271 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 PPIL6Q8IXY8 311 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 OR4C3Q8NH37 302 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 GFM2Q969S9 779 aaKnown RBP6.29□□□□□ -1.4
SMG6-205ENST00000570659 MAGOHBQ96A72 148 aaKnown RBP6.29□□□□□ -1.4
SMG6-205ENST00000570659 KLHL29Q96CT2 875 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 DNAJA3Q96EY1 480 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 CALR3Q96L12 384 aaKnown RBP6.29□□□□□ -1.4
SMG6-205ENST00000570659 C1orf147Q96MC9 270 aaPredicted RBP6.29□□□□□ -1.4
SMG6-205ENST00000570659 DUX5Q96PT3 197 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 PSD2Q9BQI7 771 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 PIMREGQ9BSJ6 248 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 ZNF747Q9BV97 191 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 KRTAP17-1Q9BYP8 105 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 PRM3Q9NNZ6 103 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 MED17Q9NVC6 651 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 CORO1CQ9ULV4 474 aaPredicted RBP6.29□□□□□ -1.4
SMG6-205ENST00000570659 ICAM5Q9UMF0 924 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 ZNF281Q9Y2X9 895 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 TSC22D4Q9Y3Q8 395 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 EPPK1P58107 5090 aaKnown RBP6.28□□□□□ -1.4
SMG6-205ENST00000570659 LOC105371242A0A075B767 164 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 OR5H1A6NKK0 313 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 SUPT3HB4E1H0 165 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 DNALI1O14645 258 aaPredicted RBP6.28□□□□□ -1.4
SMG6-205ENST00000570659 SUPT3HO75486 399 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 UTS2O95399 124 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 H6PDO95479 791 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 STAMBPO95630 424 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 ITGA5P08648 1049 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 TACSTD2P09758 323 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 LINGO3P0C6S8 592 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 ADRA2CP18825 462 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 CSNK2A2P19784 350 aaPredicted RBP6.28□□□□□ -1.4
SMG6-205ENST00000570659 PGCP20142 388 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 APEX1P27695 318 aaKnown RBP6.28□□□□□ -1.4
SMG6-205ENST00000570659 HPDP32754 393 aaPredicted RBP6.28□□□□□ -1.4
SMG6-205ENST00000570659 RBMXP38159 391 aaKnown RBP6.28□□□□□ -1.4
SMG6-205ENST00000570659 ALDH9A1P49189 494 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 PRIM2P49643 509 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 ZNF75DP51815 510 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 MANFP55145 182 aaKnown RBP6.28□□□□□ -1.4
SMG6-205ENST00000570659 TRAF3Q13114 568 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 EFR3AQ14156 821 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 IQCCQ4KMZ1 466 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 CCNYL2Q5T2Q4 361 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 C9orf135Q5VTT2 229 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 CCDC137Q6PK04 289 aaKnown RBP6.28□□□□□ -1.4
SMG6-205ENST00000570659 Q6ZT83 130 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 MYPOPQ86VE0 399 aaPredicted RBP6.28□□□□□ -1.4
SMG6-205ENST00000570659 CENPLQ8N0S6 344 aaPredicted RBP6.28□□□□□ -1.4
SMG6-205ENST00000570659 FBXL14Q8N1E6 418 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 METTL4Q8N3J2 472 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 TXLNBQ8N3L3 684 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 TCAIMQ8N3R3 496 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 GTPBP8Q8N3Z3 284 aaPredicted RBP6.28□□□□□ -1.4
SMG6-205ENST00000570659 RNF10Q8N5U6 811 aaKnown RBP6.28□□□□□ -1.4
SMG6-205ENST00000570659 ZNF675Q8TD23 568 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 FBF1Q8TES7 1133 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 ZFAND2BQ8WV99 257 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 C22orf15Q8WYQ4 148 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 PIK3R3Q92569 461 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 MTBPQ96DY7 904 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 OTUB1Q96FW1 271 aaPredicted RBP6.28□□□□□ -1.4
SMG6-205ENST00000570659 SH3YL1Q96HL8 342 aaPredicted RBP6.28□□□□□ -1.4
SMG6-205ENST00000570659 MRGPRX4Q96LA9 322 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 SLC6A7Q99884 636 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 INPP5KQ9BT40 448 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 HDHD5Q9BXW7 423 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 RHOJQ9H4E5 214 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 NARFLQ9H6Q4 476 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 FAIMQ9NVQ4 179 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 FAM120CQ9NX05 1096 aaKnown RBP6.28□□□□□ -1.4
SMG6-205ENST00000570659 OPTCQ9UBM4 332 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 METRNQ9UJH8 293 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 ZNF225Q9UK10 706 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 POU2F3Q9UKI9 436 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 MCTS1Q9ULC4 181 aaKnown RBP6.28□□□□□ -1.4
SMG6-205ENST00000570659 ZKSCAN5Q9Y2L8 839 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 SOX21Q9Y651 276 aaPredicted RBP6.28□□□□□ -1.4
SMG6-205ENST00000570659 ATP23Q9Y6H3 246 aa6.28□□□□□ -1.4
SMG6-205ENST00000570659 PSMG1O95456 288 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms