RNA–Protein interactions for RNA: ENST00000568340.5

CDH11-214, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-214ENST00000568340 PRG2P13727 222 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 TBXA2RP21731 343 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 HTR2AP28223 471 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 PEX2P28328 305 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 ACAA2P42765 397 aaKnown RBP9.5□□□□□ -0.89
CDH11-214ENST00000568340 OR1E2P47887 323 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 PNLIPRP2P54317 469 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 SOX8P57073 446 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 AP2B1P63010 937 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 HPCAP84074 193 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 KCNC4Q03721 635 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 CHRNB3Q05901 458 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 PLCXD2Q0VAA5 305 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 GPR68Q15743 365 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 NTRK2Q16620 822 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 DECR1Q16698 335 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 LIN52Q52LA3 116 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 FAM98BQ52LJ0 330 aaKnown RBP9.5□□□□□ -0.89
CDH11-214ENST00000568340 ZNF311Q5JNZ3 666 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 TMEM179BQ7Z7N9 219 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 LSRQ86X29 649 aaPredicted RBP9.5□□□□□ -0.89
CDH11-214ENST00000568340 CARM1Q86X55 608 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 ZDHHC21Q8IVQ6 265 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 IL22RA1Q8N6P7 574 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 OR5L2Q8NGL0 311 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 RASSF5Q8WWW0 418 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 CNOT9Q92600 299 aaKnown RBP9.5□□□□□ -0.89
CDH11-214ENST00000568340 SPATA5L1Q9BVQ7 753 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 RASSF4Q9H2L5 321 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 BAG5Q9UL15 447 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 IFT52Q9Y366 437 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 OR10H1Q9Y4A9 318 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 CHD8Q9HCK8 2581 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 USP24Q9UPU5 2620 aa9.5□□□□□ -0.89
CDH11-214ENST00000568340 CFAP47Q6ZTR5 3102 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 CPAMD8Q8IZJ3 1885 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 SERINC4A6NH21 518 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 J3KTA2 159 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 hCG_2039718K7EN88 272 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 WWP2O00308 870 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 DLGAP1O14490 977 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 HNRNPRO43390 633 aaKnown RBP9.49□□□□□ -0.89
CDH11-214ENST00000568340 FRS3O43559 492 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 OR2J2O76002 312 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 OR6B1O95007 311 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 DIRAS1O95057 198 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 FABP3P05413 133 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 FCGR1AP12314 374 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 ZNF26P17031 533 aaPredicted RBP9.49□□□□□ -0.89
CDH11-214ENST00000568340 MST1P26927 711 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 IST1P53990 364 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 PSMD4P55036 377 aaKnown RBP9.49□□□□□ -0.89
CDH11-214ENST00000568340 FBXW4P57775 412 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 SKP2Q13309 424 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 NDUFAF6Q330K2 333 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 ZNF468Q5VIY5 522 aaPredicted RBP9.49□□□□□ -0.89
CDH11-214ENST00000568340 TMEM81Q6P7N7 255 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 AMIGO2Q86SJ2 522 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 CMIPQ8IY22 773 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 PEX5LQ8IYB4 626 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 C10orf67Q8IYJ2 551 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 SLC15A4Q8N697 577 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 PIK3C3Q8NEB9 887 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 SPPL2AQ8TCT8 520 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 GRHL3Q8TE85 626 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 THAP3Q8WTV1 239 aaPredicted RBP9.49□□□□□ -0.89
CDH11-214ENST00000568340 GATA6Q92908 595 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 SPACA9Q96E40 222 aaPredicted RBP9.49□□□□□ -0.89
CDH11-214ENST00000568340 ARSGQ96EG1 525 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 CENPNQ96H22 339 aaPredicted RBP9.49□□□□□ -0.89
CDH11-214ENST00000568340 TPD52L3Q96J77 140 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 IP6K3Q96PC2 410 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 NODALQ96S42 347 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 ADOQ96SZ5 270 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 BARD1Q99728 777 aaKnown RBP9.49□□□□□ -0.89
CDH11-214ENST00000568340 GABARAPL1Q9H0R8 117 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 TRIM45Q9H8W5 580 aaPredicted RBP9.49□□□□□ -0.89
CDH11-214ENST00000568340 PROK2Q9HC23 129 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 UBQLN4Q9NRR5 601 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 RYDENQ9NUL5 291 aaKnown RBP9.49□□□□□ -0.89
CDH11-214ENST00000568340 DNAJB9Q9UBS3 223 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 DTNAQ9Y4J8 743 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 NPFFR2Q9Y5X5 522 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 LYVE1Q9Y5Y7 322 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 CHCHD2Q9Y6H1 151 aaPredicted RBP9.49□□□□□ -0.89
CDH11-214ENST00000568340 CELSR3Q9NYQ7 3312 aa9.49□□□□□ -0.89
CDH11-214ENST00000568340 MAP1BP46821 2468 aaKnown RBP9.48□□□□□ -0.89
CDH11-214ENST00000568340 IGLV3-32A0A0A0MS00 114 aa9.48□□□□□ -0.89
CDH11-214ENST00000568340 E9PQ18 207 aa9.48□□□□□ -0.89
CDH11-214ENST00000568340 CLOCKO15516 846 aa9.48□□□□□ -0.89
CDH11-214ENST00000568340 NKX2-8O15522 239 aa9.48□□□□□ -0.89
CDH11-214ENST00000568340 FMO6PO60774 539 aa9.48□□□□□ -0.89
CDH11-214ENST00000568340 ITGA10O75578 1167 aa9.48□□□□□ -0.89
CDH11-214ENST00000568340 ATP6V1C1P21283 382 aa9.48□□□□□ -0.89
CDH11-214ENST00000568340 FASP25445 335 aa9.48□□□□□ -0.89
CDH11-214ENST00000568340 EVI2BP34910 448 aa9.48□□□□□ -0.89
CDH11-214ENST00000568340 SOX3P41225 446 aa9.48□□□□□ -0.89
CDH11-214ENST00000568340 PTDSS1P48651 473 aaKnown RBP9.48□□□□□ -0.89
CDH11-214ENST00000568340 RNF144AP50876 292 aaPredicted RBP9.48□□□□□ -0.89
CDH11-214ENST00000568340 HMGA2P52926 109 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms