RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 CITO14578 2027 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 ASCC3Q8N3C0 2202 aaKnown RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 DHRS12A0PJE2 317 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 A6NL46 340 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 KPNA4O00629 521 aaPredicted RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 SMAD9O15198 467 aaKnown RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 GRAP2O75791 330 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 NGFRP08138 427 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 TMEM11P17152 192 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 IMPDH1P20839 514 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 SAT1P21673 171 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 RBMS1P29558 406 aaKnown RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 GNL1P36915 607 aaPredicted RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 CAPGP40121 348 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 CLCNKAP51800 687 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 MAD2L1Q13257 205 aaPredicted RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 CYTH1Q15438 398 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 ZNF585BQ52M93 769 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 ZNF628Q5EBL2 1059 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 TECRLQ5HYJ1 363 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 CCNYL2Q5T2Q4 361 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 HES3Q5TGS1 186 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 C9orf57Q5W0N0 161 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 FRG2Q64ET8 278 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 BRAT1Q6PJG6 821 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 FIGLAQ6QHK4 219 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 ACOT1Q86TX2 421 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 CDR2LQ86X02 465 aaPredicted RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 CENPLQ8N0S6 344 aaPredicted RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 CLYBLQ8N0X4 340 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 DEFB106AQ8N104 65 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 SIX6OS1Q8N1H7 587 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 SNX31Q8N9S9 440 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 TRPV3Q8NET8 790 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 OR52I2Q8NH67 350 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 DQX1Q8TE96 717 aaKnown RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 S100ZQ8WXG8 99 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 TMA16Q96EY4 203 aaKnown RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 PIWIL1Q96J94 861 aaKnown RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 HARBI1Q96MB7 349 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 TBL1YQ9BQ87 522 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 WDR55Q9H6Y2 383 aaPredicted RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 IARS2Q9NSE4 1012 aaKnown RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 GIMAP4Q9NUV9 329 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 SUN2Q9UH99 717 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 ZNF639Q9UID6 485 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 ANAPC2Q9UJX6 822 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 CDH9Q9ULB4 789 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 NCKAP1Q9Y2A7 1128 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 TMED5Q9Y3A6 229 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 CHD6Q8TD26 2715 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 UBXN8O00124 270 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 TO15178 435 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 ZMPSTE24O75844 475 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 CHRNGP07510 517 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 IGHV4-30-4P0DP06 118 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 ALPPL2P10696 532 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 ERCC2P18074 760 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 HOXC13P31276 330 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 LEPRP48357 1165 aaKnown RBP3.85□□□□□ -1.79
LINC00561-201ENST00000565815 PKNOX1P55347 436 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 CBX3Q13185 183 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 IL18R1Q13478 541 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 NTRK2Q16620 822 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 AGKQ53H12 422 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 DCAF6Q58WW2 860 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 BRMS1LQ5PSV4 323 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 PM20D1Q6GTS8 502 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 ZNF773Q6PK81 442 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 C9orf47Q6ZRZ4 202 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 CUZD1Q86UP6 607 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 SFRP1Q8N474 314 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 GBGT1Q8N5D6 347 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 DHRSXQ8N5I4 330 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 RHEBL1Q8TAI7 183 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 TAAR8Q969N4 342 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 PPWD1Q96BP3 646 aaKnown RBP3.85□□□□□ -1.79
LINC00561-201ENST00000565815 EFHD2Q96C19 240 aaPredicted RBP3.85□□□□□ -1.79
LINC00561-201ENST00000565815 C12orf43Q96C57 262 aaKnown RBP3.85□□□□□ -1.79
LINC00561-201ENST00000565815 SIPA1Q96FS4 1042 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 IL12RB2Q99665 862 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 MRPL45Q9BRJ2 306 aaKnown RBP3.85□□□□□ -1.79
LINC00561-201ENST00000565815 MLPHQ9BV36 600 aaPredicted RBP3.85□□□□□ -1.79
LINC00561-201ENST00000565815 OPA3Q9H6K4 179 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 CXorf21Q9HAI6 301 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 SPHK2Q9NRA0 654 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 ATAD3AQ9NVI7 634 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 SMPD3Q9NY59 655 aaPredicted RBP3.85□□□□□ -1.79
LINC00561-201ENST00000565815 HAO2Q9NYQ3 351 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 THAP10Q9P2Z0 257 aaPredicted RBP3.85□□□□□ -1.79
LINC00561-201ENST00000565815 CCL26Q9Y258 94 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 FADS3Q9Y5Q0 445 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 OBSL1O75147 1896 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 FASNP49327 2511 aaKnown RBP3.85□□□□□ -1.79
LINC00561-201ENST00000565815 A0A0G2JPF8 293 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 CYSRT1A8MQ03 144 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 HNRNPCL3B7ZW38 293 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 ANGPT2O15123 496 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 SLC7A4O43246 635 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 HUS1O60921 280 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms