RNA–Protein interactions for RNA: ENST00000564815.5

COMMD4-211, Transcript of COMM domain containing 4, humanhuman

TSL 3 BASIC

Gene COMMD4, Length 639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-211ENST00000564815 THBDP07204 575 aa12.73□□□□□ -0.37
COMMD4-211ENST00000564815 TUBBP07437 444 aa12.73□□□□□ -0.37
COMMD4-211ENST00000564815 CTAGE8P0CG41 777 aa12.73□□□□□ -0.37
COMMD4-211ENST00000564815 DDX5P17844 614 aaKnown RBP12.73□□□□□ -0.37
COMMD4-211ENST00000564815 LCN1P31025 176 aa12.73□□□□□ -0.37
COMMD4-211ENST00000564815 IDUAP35475 653 aa12.73□□□□□ -0.37
COMMD4-211ENST00000564815 CARD18P57730 90 aa12.73□□□□□ -0.37
COMMD4-211ENST00000564815 RPS4XP62701 263 aaKnown RBP12.73□□□□□ -0.37
COMMD4-211ENST00000564815 SLC29A2Q14542 456 aa12.73□□□□□ -0.37
COMMD4-211ENST00000564815 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.73□□□□□ -0.37
COMMD4-211ENST00000564815 WHAMMP3Q1A5X7 153 aa12.73□□□□□ -0.37
COMMD4-211ENST00000564815 TMEM44Q2T9K0 475 aa12.73□□□□□ -0.37
COMMD4-211ENST00000564815 GLE1Q53GS7 698 aaKnown RBP12.73□□□□□ -0.37
COMMD4-211ENST00000564815 CFAP157Q5JU67 520 aa12.73□□□□□ -0.37
COMMD4-211ENST00000564815 TMEM201Q5SNT2 666 aa12.73□□□□□ -0.37
COMMD4-211ENST00000564815 TRIM46Q7Z4K8 759 aa12.73□□□□□ -0.37
COMMD4-211ENST00000564815 MISPQ8IVT2 679 aa12.73□□□□□ -0.37
COMMD4-211ENST00000564815 HOMEZQ8IX15 550 aa12.73□□□□□ -0.37
COMMD4-211ENST00000564815 CTAGE4Q8IX94 777 aa12.73□□□□□ -0.37
COMMD4-211ENST00000564815 GTPBP8Q8N3Z3 284 aaPredicted RBP12.73□□□□□ -0.37
COMMD4-211ENST00000564815 CDRT4Q8N9R6 151 aa12.73□□□□□ -0.37
COMMD4-211ENST00000564815 OR6Y1Q8NGX8 325 aa12.73□□□□□ -0.37
COMMD4-211ENST00000564815 OR2V1Q8NHB1 315 aa12.73□□□□□ -0.37
COMMD4-211ENST00000564815 OSTF1Q92882 214 aa12.73□□□□□ -0.37
COMMD4-211ENST00000564815 C16orf45Q96MC5 204 aaPredicted RBP12.73□□□□□ -0.37
COMMD4-211ENST00000564815 RTN4RQ9BZR6 473 aa12.73□□□□□ -0.37
COMMD4-211ENST00000564815 ACTR6Q9GZN1 396 aa12.73□□□□□ -0.37
COMMD4-211ENST00000564815 CLEC4AQ9UMR7 237 aa12.73□□□□□ -0.37
COMMD4-211ENST00000564815 USF3Q68DE3 2245 aa12.73□□□□□ -0.37
COMMD4-211ENST00000564815 RTTNQ86VV8 2226 aa12.73□□□□□ -0.37
COMMD4-211ENST00000564815 VPS13CQ709C8 3753 aa12.73□□□□□ -0.37
COMMD4-211ENST00000564815 NSD1Q96L73 2696 aaPredicted RBP12.73□□□□□ -0.37
COMMD4-211ENST00000564815 KIF2AO00139 706 aaPredicted RBP12.72□□□□□ -0.37
COMMD4-211ENST00000564815 SCDO00767 359 aa12.72□□□□□ -0.37
COMMD4-211ENST00000564815 CXCL13O43927 109 aa12.72□□□□□ -0.37
COMMD4-211ENST00000564815 SEC22BO75396 215 aa12.72□□□□□ -0.37
COMMD4-211ENST00000564815 PSMG1O95456 288 aa12.72□□□□□ -0.37
COMMD4-211ENST00000564815 HSPA4LO95757 839 aa12.72□□□□□ -0.37
COMMD4-211ENST00000564815 NGFRP08138 427 aa12.72□□□□□ -0.37
COMMD4-211ENST00000564815 PSMB1P20618 241 aaKnown RBP12.72□□□□□ -0.37
COMMD4-211ENST00000564815 EIF1P41567 113 aaKnown RBP12.72□□□□□ -0.37
COMMD4-211ENST00000564815 SLC6A8P48029 635 aa12.72□□□□□ -0.37
COMMD4-211ENST00000564815 SERPINB4P48594 390 aa12.72□□□□□ -0.37
COMMD4-211ENST00000564815 PRKAG1P54619 331 aa12.72□□□□□ -0.37
COMMD4-211ENST00000564815 MANFP55145 182 aaKnown RBP12.72□□□□□ -0.37
COMMD4-211ENST00000564815 GRAMD1BQ3KR37 738 aa12.72□□□□□ -0.37
COMMD4-211ENST00000564815 UBAP2Q5T6F2 1119 aaKnown RBP12.72□□□□□ -0.37
COMMD4-211ENST00000564815 HBMQ6B0K9 141 aa12.72□□□□□ -0.37
COMMD4-211ENST00000564815 ALKBH2Q6NS38 261 aa12.72□□□□□ -0.37
COMMD4-211ENST00000564815 NOXRED1Q6NXP6 359 aa12.72□□□□□ -0.37
COMMD4-211ENST00000564815 C22orf34Q6ZV56 151 aa12.72□□□□□ -0.37
COMMD4-211ENST00000564815 GGNQ86UU5 652 aa12.72□□□□□ -0.37
COMMD4-211ENST00000564815 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.72□□□□□ -0.37
COMMD4-211ENST00000564815 SLC9A6Q92581 669 aa12.72□□□□□ -0.37
COMMD4-211ENST00000564815 AKAP1Q92667 903 aaKnown RBP eCLIP12.72□□□□□ -0.37
COMMD4-211ENST00000564815 GTPBP3Q969Y2 492 aaKnown RBP12.72□□□□□ -0.37
COMMD4-211ENST00000564815 ZBED6CLQ96FA7 236 aaPredicted RBP12.72□□□□□ -0.37
COMMD4-211ENST00000564815 KCNA7Q96RP8 456 aa12.72□□□□□ -0.37
COMMD4-211ENST00000564815 ESRP2Q9H6T0 727 aaKnown RBP12.72□□□□□ -0.37
COMMD4-211ENST00000564815 EQTNQ9NQ60 294 aa12.72□□□□□ -0.37
COMMD4-211ENST00000564815 UBQLN4Q9NRR5 601 aa12.72□□□□□ -0.37
COMMD4-211ENST00000564815 LAMP3Q9UQV4 416 aa12.72□□□□□ -0.37
COMMD4-211ENST00000564815 POLR3HQ9Y535 204 aaPredicted RBP12.72□□□□□ -0.37
COMMD4-211ENST00000564815 PCNX3Q9H6A9 2034 aa12.72□□□□□ -0.37
COMMD4-211ENST00000564815 GXYLT2A0PJZ3 443 aa12.71□□□□□ -0.37
COMMD4-211ENST00000564815 C7orf72A4D263 438 aa12.71□□□□□ -0.37
COMMD4-211ENST00000564815 GJE1A6NN92 205 aa12.71□□□□□ -0.37
COMMD4-211ENST00000564815 SHISA8B8ZZ34 492 aa12.71□□□□□ -0.37
COMMD4-211ENST00000564815 SLC28A1O00337 649 aa12.71□□□□□ -0.37
COMMD4-211ENST00000564815 CRLF1O75462 422 aa12.71□□□□□ -0.37
COMMD4-211ENST00000564815 RSL1D1O76021 490 aaKnown RBP12.71□□□□□ -0.37
COMMD4-211ENST00000564815 NKX2-2O95096 273 aa12.71□□□□□ -0.37
COMMD4-211ENST00000564815 IFNA2P01563 188 aa12.71□□□□□ -0.37
COMMD4-211ENST00000564815 CD3EP07766 207 aa12.71□□□□□ -0.37
COMMD4-211ENST00000564815 ABHD2P08910 425 aa12.71□□□□□ -0.37
COMMD4-211ENST00000564815 MYL2P10916 166 aa12.71□□□□□ -0.37
COMMD4-211ENST00000564815 SLC18A2Q05940 514 aa12.71□□□□□ -0.37
COMMD4-211ENST00000564815 HSPB3Q12988 150 aa12.71□□□□□ -0.37
COMMD4-211ENST00000564815 TNK1Q13470 666 aa12.71□□□□□ -0.37
COMMD4-211ENST00000564815 RNPS1Q15287 305 aaKnown RBP12.71□□□□□ -0.37
COMMD4-211ENST00000564815 CLEC12BQ2HXU8 276 aa12.71□□□□□ -0.37
COMMD4-211ENST00000564815 CTU2Q2VPK5 515 aaKnown RBP12.71□□□□□ -0.37
COMMD4-211ENST00000564815 ADAM5Q6NVV9 412 aa12.71□□□□□ -0.37
COMMD4-211ENST00000564815 ZCCHC12Q6PEW1 402 aa12.71□□□□□ -0.37
COMMD4-211ENST00000564815 APOOLQ6UXV4 268 aa12.71□□□□□ -0.37
COMMD4-211ENST00000564815 TRMT10CQ7L0Y3 403 aaKnown RBP12.71□□□□□ -0.37
COMMD4-211ENST00000564815 CXXC5Q7LFL8 322 aaKnown RBP12.71□□□□□ -0.37
COMMD4-211ENST00000564815 TRABD2AQ86V40 505 aa12.71□□□□□ -0.37
COMMD4-211ENST00000564815 NUP43Q8NFH3 380 aa12.71□□□□□ -0.37
COMMD4-211ENST00000564815 HSD17B8Q92506 261 aa12.71□□□□□ -0.37
COMMD4-211ENST00000564815 PIK3R3Q92569 461 aa12.71□□□□□ -0.37
COMMD4-211ENST00000564815 ARL8AQ96BM9 186 aa12.71□□□□□ -0.37
COMMD4-211ENST00000564815 TMEM204Q9BSN7 226 aa12.71□□□□□ -0.37
COMMD4-211ENST00000564815 TLN2Q9Y4G6 2542 aa12.71□□□□□ -0.37
COMMD4-211ENST00000564815 A0A1W2PRB8 838 aa12.7□□□□□ -0.38
COMMD4-211ENST00000564815 TNFSF11O14788 317 aa12.7□□□□□ -0.38
COMMD4-211ENST00000564815 PDPK1O15530 556 aa12.7□□□□□ -0.38
COMMD4-211ENST00000564815 RGS14O43566 566 aa12.7□□□□□ -0.38
COMMD4-211ENST00000564815 SOX30O94993 753 aa12.7□□□□□ -0.38
COMMD4-211ENST00000564815 OXSR1O95747 527 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms