RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 POMPQ9Y244 141 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 ATG4BQ9Y4P1 393 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 PCDHB14Q9Y5E9 798 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 TRGV5A0A0B4J1U4 118 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 A0A1W2PRB8 838 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 C1orf226A1L170 272 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 PRORSD1PA6NEY8 169 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 NME4O00746 187 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 HCN1O60741 890 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 CCL3P10147 92 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 HOXB9P17482 250 aaPredicted RBP11.59□□□□□ -0.55
PSEN1-219ENST00000556951 BMP5P22003 454 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 PTPN6P29350 595 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 TLX1P31314 330 aaPredicted RBP11.59□□□□□ -0.55
PSEN1-219ENST00000556951 ACTR3P61158 418 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 SKP1P63208 163 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 LIPEQ05469 1076 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 TRIM25Q14258 630 aaKnown RBP11.59□□□□□ -0.55
PSEN1-219ENST00000556951 PRSS53Q2L4Q9 553 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 KRTAP24-1Q3LI83 254 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 ZNF621Q6ZSS3 439 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 MSRB3Q8IXL7 192 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 CLECL1Q8IZS7 167 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 ZNF321PQ8N8H1 164 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 WDR60Q8WVS4 1066 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 ASB15Q8WXK1 588 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 OR5P2Q8WZ92 322 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 MAPKAP1Q9BPZ7 522 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 BDH2Q9BUT1 245 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 THUMPD3Q9BV44 507 aaKnown RBP11.59□□□□□ -0.55
PSEN1-219ENST00000556951 PLA2G12AQ9BZM1 189 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 PROK2Q9HC23 129 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 TEX10Q9NXF1 929 aaPredicted RBP11.59□□□□□ -0.55
PSEN1-219ENST00000556951 SLC25A37Q9NYZ2 338 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 PACSIN3Q9UKS6 424 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 PSME2Q9UL46 239 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 MMACHCQ9Y4U1 282 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 PCDHGB3Q9Y5G1 929 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 SPACA6W5XKT8 324 aa11.59□□□□□ -0.55
PSEN1-219ENST00000556951 NCKAP5O14513 1909 aa11.58□□□□□ -0.55
PSEN1-219ENST00000556951 TUBAL3A6NHL2 446 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 EVPLLA8MZ36 301 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 FAM47E-STBD1D6RA91 191 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 PDPK1O15530 556 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 ARHGEF9O43307 516 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 BCAS2O75934 225 aaPredicted RBP11.58□□□□□ -0.56
PSEN1-219ENST00000556951 AIFM1O95831 613 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 EPPINO95925 133 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 GSNP06396 782 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 CPN2P22792 545 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 PPIBP23284 216 aaKnown RBP11.58□□□□□ -0.56
PSEN1-219ENST00000556951 PIGAP37287 484 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 BUD31P41223 144 aaPredicted RBP11.58□□□□□ -0.56
PSEN1-219ENST00000556951 CDKN2CP42773 168 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 GSK3BP49841 420 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 ZNF136P52737 540 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 LIM2P55344 173 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 BNIP2Q12982 314 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 MLC1Q15049 377 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 MPEG1Q2M385 716 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 RABL3Q5HYI8 236 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 RTL4Q6ZR62 310 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 TRIML2Q8N7C3 387 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 RNF148Q8N7C7 305 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 OR4A15Q8NGL6 344 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 CIDECQ96AQ7 238 aaPredicted RBP11.58□□□□□ -0.56
PSEN1-219ENST00000556951 CCDC124Q96CT7 223 aaKnown RBP11.58□□□□□ -0.56
PSEN1-219ENST00000556951 ECSITQ9BQ95 431 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 CPPED1Q9BRF8 314 aaPredicted RBP11.58□□□□□ -0.56
PSEN1-219ENST00000556951 RASSF4Q9H2L5 321 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 MUC13Q9H3R2 512 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 LDAHQ9H6V9 325 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 SH2D2AQ9NP31 389 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 SLC35C2Q9NQQ7 365 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 ACSS1Q9NUB1 689 aaPredicted RBP11.58□□□□□ -0.56
PSEN1-219ENST00000556951 ZNF629Q9UEG4 869 aaPredicted RBP11.58□□□□□ -0.56
PSEN1-219ENST00000556951 FOXD3Q9UJU5 478 aaPredicted RBP11.58□□□□□ -0.56
PSEN1-219ENST00000556951 CES1P1Q9UKY3 287 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 GMEB1Q9Y692 573 aa11.58□□□□□ -0.56
PSEN1-219ENST00000556951 MGAM2Q2M2H8 2515 aa11.57□□□□□ -0.56
PSEN1-219ENST00000556951 MYOCOSA0A1B0GUC4 107 aa11.57□□□□□ -0.56
PSEN1-219ENST00000556951 CLCA1A8K7I4 914 aa11.57□□□□□ -0.56
PSEN1-219ENST00000556951 DVL2O14641 736 aa11.57□□□□□ -0.56
PSEN1-219ENST00000556951 ACOT8O14734 319 aa11.57□□□□□ -0.56
PSEN1-219ENST00000556951 PGRMC2O15173 223 aa11.57□□□□□ -0.56
PSEN1-219ENST00000556951 ENTPD5O75356 428 aa11.57□□□□□ -0.56
PSEN1-219ENST00000556951 STAMBPO95630 424 aa11.57□□□□□ -0.56
PSEN1-219ENST00000556951 C6orf47O95873 294 aa11.57□□□□□ -0.56
PSEN1-219ENST00000556951 NR2F6P10588 404 aa11.57□□□□□ -0.56
PSEN1-219ENST00000556951 EFNA1P20827 205 aaPredicted RBP11.57□□□□□ -0.56
PSEN1-219ENST00000556951 FRKP42685 505 aaPredicted RBP11.57□□□□□ -0.56
PSEN1-219ENST00000556951 MANFP55145 182 aaKnown RBP11.57□□□□□ -0.56
PSEN1-219ENST00000556951 MTPNP58546 118 aa11.57□□□□□ -0.56
PSEN1-219ENST00000556951 MS4A2Q01362 244 aa11.57□□□□□ -0.56
PSEN1-219ENST00000556951 TNFRSF17Q02223 184 aa11.57□□□□□ -0.56
PSEN1-219ENST00000556951 SELPLGQ14242 412 aa11.57□□□□□ -0.56
PSEN1-219ENST00000556951 GTDC1Q4AE62 458 aa11.57□□□□□ -0.56
PSEN1-219ENST00000556951 PDLIM3Q53GG5 364 aaPredicted RBP11.57□□□□□ -0.56
PSEN1-219ENST00000556951 C18orf63Q68DL7 685 aa11.57□□□□□ -0.56
PSEN1-219ENST00000556951 SLC48A1Q6P1K1 146 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms