RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 TEX37Q96LM6 180 aa20.51■□□□□ 0.87
PABPN1-207ENST00000556821 SFXN2Q96NB2 322 aa20.51■□□□□ 0.87
PABPN1-207ENST00000556821 G6PC3Q9BUM1 346 aa20.51■□□□□ 0.87
PABPN1-207ENST00000556821 RPH3AQ9Y2J0 694 aaPredicted RBP20.51■□□□□ 0.87
PABPN1-207ENST00000556821 NAV3Q8IVL0 2385 aa20.51■□□□□ 0.87
PABPN1-207ENST00000556821 ZNF195O14628 629 aa20.5■□□□□ 0.87
PABPN1-207ENST00000556821 IGFBP2P18065 325 aa20.5■□□□□ 0.87
PABPN1-207ENST00000556821 CAPN3P20807 821 aa20.5■□□□□ 0.87
PABPN1-207ENST00000556821 TBXA2RP21731 343 aa20.5■□□□□ 0.87
PABPN1-207ENST00000556821 CEACAM8P31997 349 aaPredicted RBP20.5■□□□□ 0.87
PABPN1-207ENST00000556821 GCKP35557 465 aa20.5■□□□□ 0.87
PABPN1-207ENST00000556821 SOAT1P35610 550 aa20.5■□□□□ 0.87
PABPN1-207ENST00000556821 CLK3P49761 638 aaKnown RBP20.5■□□□□ 0.87
PABPN1-207ENST00000556821 CLDN18P56856 261 aa20.5■□□□□ 0.87
PABPN1-207ENST00000556821 NSUN5P2Q63ZY6 315 aa20.5■□□□□ 0.87
PABPN1-207ENST00000556821 ANKRD46Q86W74 232 aa20.5■□□□□ 0.87
PABPN1-207ENST00000556821 DTNBP1Q96EV8 351 aa20.5■□□□□ 0.87
PABPN1-207ENST00000556821 MAELQ96JY0 434 aaKnown RBP20.5■□□□□ 0.87
PABPN1-207ENST00000556821 SH3GL2Q99962 352 aa20.5■□□□□ 0.87
PABPN1-207ENST00000556821 TREX2Q9BQ50 279 aaPredicted RBP20.5■□□□□ 0.87
PABPN1-207ENST00000556821 TUBA1CQ9BQE3 449 aa20.5■□□□□ 0.87
PABPN1-207ENST00000556821 KCNJ16Q9NPI9 418 aa20.5■□□□□ 0.87
PABPN1-207ENST00000556821 CD8B2A6NJW9 211 aa20.49■□□□□ 0.87
PABPN1-207ENST00000556821 TRPC5OSA6NMA1 111 aa20.49■□□□□ 0.87
PABPN1-207ENST00000556821 DIAPH2O60879 1101 aa20.49■□□□□ 0.87
PABPN1-207ENST00000556821 ZNF708P17019 499 aa20.49■□□□□ 0.87
PABPN1-207ENST00000556821 CHMP24386 653 aa20.49■□□□□ 0.87
PABPN1-207ENST00000556821 TIMP3P35625 211 aa20.49■□□□□ 0.87
PABPN1-207ENST00000556821 UFM1P61960 85 aa20.49■□□□□ 0.87
PABPN1-207ENST00000556821 RPS26P62854 115 aaKnown RBP20.49■□□□□ 0.87
PABPN1-207ENST00000556821 C17orf67Q0P5P2 114 aa20.49■□□□□ 0.87
PABPN1-207ENST00000556821 GANABQ14697 944 aaKnown RBP20.49■□□□□ 0.87
PABPN1-207ENST00000556821 ENPP6Q6UWR7 440 aa20.49■□□□□ 0.87
PABPN1-207ENST00000556821 ADGRE4PQ86SQ3 457 aa20.49■□□□□ 0.87
PABPN1-207ENST00000556821 RELL2Q8NC24 303 aaPredicted RBP20.49■□□□□ 0.87
PABPN1-207ENST00000556821 OR5D16Q8NGK9 328 aa20.49■□□□□ 0.87
PABPN1-207ENST00000556821 ZPLD1Q8TCW7 415 aa20.49■□□□□ 0.87
PABPN1-207ENST00000556821 ADAMTS15Q8TE58 950 aa20.49■□□□□ 0.87
PABPN1-207ENST00000556821 ZNF75CPQ92670 426 aaPredicted RBP20.49■□□□□ 0.87
PABPN1-207ENST00000556821 C1GALT1C1Q96EU7 318 aa20.49■□□□□ 0.87
PABPN1-207ENST00000556821 CHMP6Q96FZ7 201 aa20.49■□□□□ 0.87
PABPN1-207ENST00000556821 OR7D2Q96RA2 312 aa20.49■□□□□ 0.87
PABPN1-207ENST00000556821 TRIB1Q96RU8 372 aa20.49■□□□□ 0.87
PABPN1-207ENST00000556821 FAF1Q9UNN5 650 aaPredicted RBP20.49■□□□□ 0.87
PABPN1-207ENST00000556821 GPR45Q9Y5Y3 372 aa20.49■□□□□ 0.87
PABPN1-207ENST00000556821 MBD3L4A6NDZ8 208 aaPredicted RBP20.48■□□□□ 0.87
PABPN1-207ENST00000556821 MBD3L3A6NE82 208 aaPredicted RBP20.48■□□□□ 0.87
PABPN1-207ENST00000556821 MBD3L5A6NJ08 208 aaPredicted RBP20.48■□□□□ 0.87
PABPN1-207ENST00000556821 C9JVG2 144 aa20.48■□□□□ 0.87
PABPN1-207ENST00000556821 FAM47E-STBD1D6RA91 191 aa20.48■□□□□ 0.87
PABPN1-207ENST00000556821 E9PBE3 544 aa20.48■□□□□ 0.87
PABPN1-207ENST00000556821 HK1P19367 917 aa20.48■□□□□ 0.87
PABPN1-207ENST00000556821 MSX1P28360 303 aa20.48■□□□□ 0.87
PABPN1-207ENST00000556821 IL12AP29459 219 aa20.48■□□□□ 0.87
PABPN1-207ENST00000556821 SSTR2P30874 369 aa20.48■□□□□ 0.87
PABPN1-207ENST00000556821 LCN1P31025 176 aa20.48■□□□□ 0.87
PABPN1-207ENST00000556821 CLNS1AP54105 237 aaKnown RBP20.48■□□□□ 0.87
PABPN1-207ENST00000556821 NME5P56597 212 aa20.48■□□□□ 0.87
PABPN1-207ENST00000556821 SRYQ05066 204 aa20.48■□□□□ 0.87
PABPN1-207ENST00000556821 DPY19L1Q2PZI1 675 aa20.48■□□□□ 0.87
PABPN1-207ENST00000556821 FAM174BQ3ZCQ3 159 aa20.48■□□□□ 0.87
PABPN1-207ENST00000556821 SLC9B1Q4ZJI4 515 aa20.48■□□□□ 0.87
PABPN1-207ENST00000556821 DCST2Q5T1A1 773 aa20.48■□□□□ 0.87
PABPN1-207ENST00000556821 AAGABQ6PD74 315 aa20.48■□□□□ 0.87
PABPN1-207ENST00000556821 POMZP3Q6PJE2 187 aa20.48■□□□□ 0.87
PABPN1-207ENST00000556821 SPATA19Q7Z5L4 167 aa20.48■□□□□ 0.87
PABPN1-207ENST00000556821 GATSQ8NAP1 163 aa20.48■□□□□ 0.87
PABPN1-207ENST00000556821 MBD3L2Q8NHZ7 208 aaPredicted RBP20.48■□□□□ 0.87
PABPN1-207ENST00000556821 PIWIL2Q8TC59 973 aaKnown RBP20.48■□□□□ 0.87
PABPN1-207ENST00000556821 SPOCK3Q9BQ16 436 aa20.48■□□□□ 0.87
PABPN1-207ENST00000556821 UBQLN4Q9NRR5 601 aa20.48■□□□□ 0.87
PABPN1-207ENST00000556821 NPIPA5A0A0B4J1W7 369 aa20.47■□□□□ 0.87
PABPN1-207ENST00000556821 RNF103-CHMP3A0A140T963 221 aa20.47■□□□□ 0.87
PABPN1-207ENST00000556821 PRSS51A0A1B0GVH4 220 aa20.47■□□□□ 0.87
PABPN1-207ENST00000556821 HSPB2A8KAH6 182 aa20.47■□□□□ 0.87
PABPN1-207ENST00000556821 NPIPA7E9PJI5 369 aa20.47■□□□□ 0.87
PABPN1-207ENST00000556821 SLCO1B7G3V0H7 640 aa20.47■□□□□ 0.87
PABPN1-207ENST00000556821 H0Y3Z8 333 aa20.47■□□□□ 0.87
PABPN1-207ENST00000556821 NDUFB5O43674 189 aa20.47■□□□□ 0.87
PABPN1-207ENST00000556821 KRT16P08779 473 aa20.47■□□□□ 0.87
PABPN1-207ENST00000556821 NPIPA8P0DM63 369 aa20.47■□□□□ 0.87
PABPN1-207ENST00000556821 ZNF136P52737 540 aa20.47■□□□□ 0.87
PABPN1-207ENST00000556821 SF3B4Q15427 424 aaKnown RBP eCLIP20.47■□□□□ 0.873e-9■■■■□ 20.9
PABPN1-207ENST00000556821 CD226Q15762 336 aa20.47■□□□□ 0.87
PABPN1-207ENST00000556821 HSPB2Q16082 182 aa20.47■□□□□ 0.87
PABPN1-207ENST00000556821 PLXDC2Q6UX71 529 aa20.47■□□□□ 0.87
PABPN1-207ENST00000556821 C6orf120Q7Z4R8 191 aa20.47■□□□□ 0.87
PABPN1-207ENST00000556821 OR4A15Q8NGL6 344 aa20.47■□□□□ 0.87
PABPN1-207ENST00000556821 KLHDC3Q9BQ90 382 aa20.47■□□□□ 0.87
PABPN1-207ENST00000556821 PTGES2Q9H7Z7 377 aa20.47■□□□□ 0.87
PABPN1-207ENST00000556821 A0A1W2PQD3 144 aa20.46■□□□□ 0.87
PABPN1-207ENST00000556821 NPIPB9F8W1W9 429 aa20.46■□□□□ 0.87
PABPN1-207ENST00000556821 GMFGO60234 142 aa20.46■□□□□ 0.87
PABPN1-207ENST00000556821 RCAN2Q14206 197 aa20.46■□□□□ 0.87
PABPN1-207ENST00000556821 TMEM44Q2T9K0 475 aa20.46■□□□□ 0.87
PABPN1-207ENST00000556821 ANXA8L1Q5VT79 327 aa20.46■□□□□ 0.87
PABPN1-207ENST00000556821 RAET1LQ5VY80 246 aa20.46■□□□□ 0.87
PABPN1-207ENST00000556821 ARSKQ6UWY0 536 aa20.46■□□□□ 0.87
PABPN1-207ENST00000556821 MEX3BQ6ZN04 569 aaKnown RBP20.46■□□□□ 0.87
PABPN1-207ENST00000556821 HDXQ7Z353 690 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms