RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 OR7D2Q96RA2 312 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 STACQ99469 402 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 ZBTB18Q99592 522 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 TUBA1CQ9BQE3 449 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 RTN4RQ9BZR6 473 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 PIGUQ9H490 435 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 UBQLN4Q9NRR5 601 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 DUSP22Q9NRW4 184 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 VDAC3Q9Y277 283 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 PRSS51A0A1B0GVH4 220 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 CLCA1A8K7I4 914 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 B4DXG7 233 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 ALG1L2C9J202 215 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 C9JVG2 144 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 E9PBE3 544 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 H3BML4 177 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 RNASET2O00584 256 aaKnown RBP9.66□□□□□ -0.86
SHMT2-213ENST00000554600 DVL2O14641 736 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 SEC14L5O43304 696 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 ZIC3O60481 467 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 DIAPH2O60879 1101 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 TOXO94900 526 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 ALDOCP09972 364 aaKnown RBP9.66□□□□□ -0.86
SHMT2-213ENST00000554600 PEPDP12955 493 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 PRF1P14222 555 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 CPN1P15169 458 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 H2AFXP16104 143 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-213ENST00000554600 TBXA2RP21731 343 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 MATN1P21941 496 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 CHMP24386 653 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 CHI3L1P36222 383 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-213ENST00000554600 CASP9P55211 416 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 GFRA1P56159 465 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 UFM1P61960 85 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 OCRLQ01968 901 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 GANABQ14697 944 aaKnown RBP9.66□□□□□ -0.86
SHMT2-213ENST00000554600 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.66□□□□□ -0.86
SHMT2-213ENST00000554600 DPY19L1Q2PZI1 675 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 SLC25A35Q3KQZ1 300 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 TTMPQ5BVD1 217 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 NSUN5P2Q63ZY6 315 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 OGFOD2Q6N063 350 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 APOOLQ6UXV4 268 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 SEM1Q6ZVN7 128 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 P4HA3Q7Z4N8 544 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 GRAMD2AQ8IUY3 354 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 LIX1LQ8IVB5 337 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 LRRC34Q8IZ02 419 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 MEIOBQ8N635 442 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 ZNF527Q8NB42 609 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 OR8J2Q8NGG1 315 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 OR5D16Q8NGK9 328 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 FAM110BQ8TC76 370 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 PHOSPHO1Q8TCT1 267 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 HOXB13Q92826 284 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-213ENST00000554600 TESCQ96BS2 214 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 C1GALT1C1Q96EU7 318 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 LRRC46Q96FV0 321 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 HHATLQ9HCP6 504 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 AIG1Q9NVV5 245 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 GPATCH2Q9NW75 528 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 MRPS18CQ9Y3D5 142 aaKnown RBP9.66□□□□□ -0.86
SHMT2-213ENST00000554600 KCNE3Q9Y6H6 103 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 CCDC168Q8NDH2 2452 aa9.66□□□□□ -0.86
SHMT2-213ENST00000554600 FREM1Q5H8C1 2179 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 OR2M5A3KFT3 312 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 CD8B2A6NJW9 211 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 DUXAA6NLW8 204 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 SHISA8B8ZZ34 492 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 H3BNH8 94 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 GTPBP1O00178 669 aaKnown RBP9.65□□□□□ -0.86
SHMT2-213ENST00000554600 ANKRD28O15084 1053 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 HCRTR2O43614 444 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 SOX30O94993 753 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 NUDT14O95848 222 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 UQCRC2P22695 453 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 LCN1P31025 176 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 UQCRC1P31930 480 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 LHX2P50458 406 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 ZNF41P51814 821 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-213ENST00000554600 AGFG1P52594 562 aaKnown RBP9.65□□□□□ -0.86
SHMT2-213ENST00000554600 CLDN18P56856 261 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 B3GALT5-AS1P59052 145 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 FLYWCH1Q4VC44 716 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 SLC9B1Q4ZJI4 515 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 EXOSC6Q5RKV6 272 aaKnown RBP9.65□□□□□ -0.86
SHMT2-213ENST00000554600 ATAD3BQ5T9A4 648 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 PPP4R4Q6NUP7 873 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 TNFAIP8L2Q6P589 184 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-213ENST00000554600 PLXDC2Q6UX71 529 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 C16orf62Q7Z3J2 963 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 TMCO5AQ8N6Q1 288 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 NAXEQ8NCW5 288 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 PIWIL2Q8TC59 973 aaKnown RBP9.65□□□□□ -0.86
SHMT2-213ENST00000554600 ZPLD1Q8TCW7 415 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 OR52E6Q96RD3 313 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 SPOCK3Q9BQ16 436 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 PIGQQ9BRB3 760 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 HOXD1Q9GZZ0 328 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 VIPAS39Q9H9C1 493 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms