RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 ISYNA1Q9NPH2 558 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 LYARQ9NX58 379 aaKnown RBP11.47□□□□□ -0.57
SHMT2-207ENST00000553837 AHSPQ9NZD4 102 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 MAB21L2Q9Y586 359 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 A0A1W2PP55 124 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 C7orf66A4D0T2 115 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 KHNYNO15037 678 aaKnown RBP11.46□□□□□ -0.57
SHMT2-207ENST00000553837 NDUFS4O43181 175 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 TBX19O60806 448 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 ECDO95905 644 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-207ENST00000553837 CHRM5P08912 532 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-207ENST00000553837 NR2F6P10588 404 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 ZP3P21754 424 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 SSTP61278 116 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 RPS25P62851 125 aaKnown RBP11.46□□□□□ -0.57
SHMT2-207ENST00000553837 TPBGQ13641 420 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 ZNF273Q14593 569 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 CST6Q15828 149 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 PLA1AQ53H76 456 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 C3orf38Q5JPI3 329 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 FAM209BQ5JX69 171 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 ATAT1Q5SQI0 421 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 BCL2L15Q5TBC7 163 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 C12orf73Q69YU5 71 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 WDR53Q7Z5U6 358 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-207ENST00000553837 SRFBP1Q8NEF9 429 aaKnown RBP11.46□□□□□ -0.57
SHMT2-207ENST00000553837 OR11H7Q8NGC8 314 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 OR52H1Q8NGJ2 320 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 NXPE2Q96DL1 559 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 GHITMQ9H3K2 345 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 A4GALTQ9NPC4 353 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 PCDHB16Q9NRJ7 776 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 MBD2Q9UBB5 411 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 KCND3Q9UK17 655 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 ACSL5Q9ULC5 683 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 KCNK6Q9Y257 313 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 HRH3Q9Y5N1 445 aa11.46□□□□□ -0.57
SHMT2-207ENST00000553837 AKAP8O43823 692 aaKnown RBP11.45□□□□□ -0.58
SHMT2-207ENST00000553837 APOC1P02654 83 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 SLC35G4P0C7Q5 338 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 EN2P19622 333 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-207ENST00000553837 ETV5P41161 510 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 ZNF81P51508 661 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 MAP2K6P52564 334 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 CAV3P56539 151 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 WNT4P56705 351 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 LGALSLQ3ZCW2 172 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-207ENST00000553837 KIAA1161Q6NSJ0 714 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 C7orf61Q8IZ16 206 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 HDDC3Q8N4P3 179 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 OR52I1Q8NGK6 324 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 OR2A1Q8NGT9 310 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 ST8SIA4Q92187 359 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 HGDQ93099 445 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 OTUB1Q96FW1 271 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-207ENST00000553837 SCMH1Q96GD3 660 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 KLHL15Q96M94 604 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 C12orf66Q96MD2 445 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 RBP7Q96R05 134 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 OSGEPL1Q9H4B0 414 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 TRPV4Q9HBA0 871 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 REV1Q9UBZ9 1251 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 DPP7Q9UHL4 492 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 KIF25Q9UIL4 384 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 SCML1Q9UN30 329 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 SF3B6Q9Y3B4 125 aaKnown RBP11.45□□□□□ -0.58
SHMT2-207ENST00000553837 A0A0A6YYD5 115 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 A0A1B0GVI7 797 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 GLOD5A6NK44 160 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 OR52A4PA6NMU1 304 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 GMDSO60547 372 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 SNRNP200O75643 2136 aaKnown RBP11.45□□□□□ -0.58
SHMT2-207ENST00000553837 IFNW1P05000 195 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 SERPIND1P05546 499 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 GABRA5P31644 462 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 BMP8BP34820 402 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 FEN1P39748 380 aaKnown RBP11.45□□□□□ -0.58
SHMT2-207ENST00000553837 AVPR1BP47901 424 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 CTBP2P56545 445 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 COL9A2Q14055 689 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-207ENST00000553837 LRRC32Q14392 662 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 SYPL1Q16563 259 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 DUSP6Q16828 381 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 TCTN3Q6NUS6 607 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 BMP8AQ7Z5Y6 402 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 HMGN2P46Q86SG4 172 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 TCEANCQ8N8B7 351 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 OR5D16Q8NGK9 328 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 OTULINQ96BN8 352 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 SGTBQ96EQ0 304 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 SLC6A18Q96N87 628 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 CAMK1GQ96NX5 476 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 OR2M2Q96R28 347 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 DPH7Q9BTV6 452 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 WDR26Q9H7D7 661 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 IMP3Q9NV31 184 aaKnown RBP11.45□□□□□ -0.58
SHMT2-207ENST00000553837 MGAT4BQ9UQ53 548 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 MRPS7Q9Y2R9 242 aaKnown RBP11.45□□□□□ -0.58
SHMT2-207ENST00000553837 SESN1Q9Y6P5 492 aa11.45□□□□□ -0.58
SHMT2-207ENST00000553837 DOCK8Q8NF50 2099 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms