RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 SLC28A2O43868 658 aa13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 BCAS1O75363 584 aaPredicted RBP13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 SNX4O95219 450 aa13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 PGM3O95394 542 aa13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 RFPL3SP0C7P2 107 aa13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 NR2F1P10589 423 aa13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 ESRRAP11474 423 aaPredicted RBP13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 RPP38P78345 283 aaKnown RBP13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 CDK6Q00534 326 aa13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 RBBP4Q09028 425 aa13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 NFATC3Q12968 1075 aa13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 ART3Q13508 389 aa13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 FXNQ16595 210 aa13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 ZNF630Q2M218 657 aaPredicted RBP13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 PDZK1Q5T2W1 519 aa13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 TIGD3Q6B0B8 471 aa13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 MARCH3Q86UD3 253 aa13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 PGAM4Q8N0Y7 254 aa13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 FADS6Q8N9I5 356 aa13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 FAM71CQ8NEG0 241 aa13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 NFKBIDQ8NI38 313 aa13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 PMM1Q92871 262 aa13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 SLC7A6OSQ96CW6 309 aaPredicted RBP13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 REXO5Q96IC2 774 aaKnown RBP13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 SH3GL1Q99961 368 aa13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 DOHHQ9BU89 302 aa13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 SPATA9Q9BWV2 254 aa13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 HOXD1Q9GZZ0 328 aa13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 METTL7AQ9H8H3 244 aa13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 SUCOQ9UBS9 1254 aaKnown RBP13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 ANAPC2Q9UJX6 822 aa13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.55□□□□□ -0.24
MTHFD1-204ENST00000553405 RELNP78509 3460 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 A0A0G2JPF8 293 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 C2orf72A6NCS6 295 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 FAM220BPB1ANY3 271 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 B2RBV5 119 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 TMEM229AB2RXF0 380 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 HNRNPCL2B2RXH8 293 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 HNRNPCL3B7ZW38 293 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 KLRC4-KLRK1H3BQV0 150 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 SUV39H1O43463 412 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 SCO2O43819 266 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 HS6ST1O60243 411 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 HNRNPCL1O60812 293 aaKnown RBP13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 PRB1P04280 392 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 HNRNPCL4P0DMR1 293 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 ATP6V1C1P21283 382 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 PCGF2P35227 344 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 ADH7P40394 386 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 RFC3P40938 356 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 GSK3BP49841 420 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 CRISP3P54108 245 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 BNIP1Q12981 228 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 SCARB2Q14108 478 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 FGFBP1Q14512 234 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 GPR68Q15743 365 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 VMACQ2NL98 169 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 GPAT3Q53EU6 434 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 REEP3Q6NUK4 255 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 BNC2Q6ZN30 1099 aaPredicted RBP13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 RINLQ6ZS11 566 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 HMGN2P46Q86SG4 172 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 ZNF843Q8N446 348 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 C11orf65Q8NCR3 313 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 TTTY12Q9BZ98 90 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 ZNF703Q9H7S9 590 aaPredicted RBP13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 MTHFD2LQ9H903 347 aaPredicted RBP13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 ZFP64Q9NPA5 681 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 TAS2R1Q9NYW7 299 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 KLRF1Q9NZS2 232 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 CD300AQ9UGN4 299 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 DTNAQ9Y4J8 743 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 NBASA2RRP1 2371 aa13.54□□□□□ -0.24
MTHFD1-204ENST00000553405 PRORSD1PA6NEY8 169 aa13.53□□□□□ -0.24
MTHFD1-204ENST00000553405 SERINC4A6NH21 518 aa13.53□□□□□ -0.24
MTHFD1-204ENST00000553405 CLDN24A6NM45 220 aa13.53□□□□□ -0.24
MTHFD1-204ENST00000553405 DNAJA2O60884 412 aa13.53□□□□□ -0.24
MTHFD1-204ENST00000553405 ANGPTL1O95841 491 aa13.53□□□□□ -0.24
MTHFD1-204ENST00000553405 EPPINO95925 133 aa13.53□□□□□ -0.24
MTHFD1-204ENST00000553405 ETS2P15036 469 aa13.53□□□□□ -0.24
MTHFD1-204ENST00000553405 MST1P26927 711 aa13.53□□□□□ -0.24
MTHFD1-204ENST00000553405 RNF144AP50876 292 aaPredicted RBP13.53□□□□□ -0.24
MTHFD1-204ENST00000553405 TDGF1P3P51864 188 aa13.53□□□□□ -0.24
MTHFD1-204ENST00000553405 MNAT1P51948 309 aa13.53□□□□□ -0.24
MTHFD1-204ENST00000553405 EEFSECP57772 596 aaKnown RBP13.53□□□□□ -0.24
MTHFD1-204ENST00000553405 KCNJ2P63252 427 aa13.53□□□□□ -0.24
MTHFD1-204ENST00000553405 LIPEQ05469 1076 aa13.53□□□□□ -0.24
MTHFD1-204ENST00000553405 CYP51A1Q16850 503 aa13.53□□□□□ -0.24
MTHFD1-204ENST00000553405 CCDC80Q76M96 950 aa13.53□□□□□ -0.24
MTHFD1-204ENST00000553405 COMTD1Q86VU5 262 aa13.53□□□□□ -0.24
MTHFD1-204ENST00000553405 HIPK4Q8NE63 616 aa13.53□□□□□ -0.24
MTHFD1-204ENST00000553405 OR2M3Q8NG83 312 aa13.53□□□□□ -0.24
MTHFD1-204ENST00000553405 BBS10Q8TAM1 723 aa13.53□□□□□ -0.24
MTHFD1-204ENST00000553405 DUSP19Q8WTR2 217 aa13.53□□□□□ -0.24
MTHFD1-204ENST00000553405 ZNF524Q96C55 264 aa13.53□□□□□ -0.24
MTHFD1-204ENST00000553405 SNRNP40Q96DI7 357 aaKnown RBP13.53□□□□□ -0.24
MTHFD1-204ENST00000553405 SLX1AQ9BQ83 275 aa13.53□□□□□ -0.24
MTHFD1-204ENST00000553405 ECSITQ9BQ95 431 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms