RNA–Protein interactions for RNA: ENST00000553331.5

PNN-202, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3 BASIC

Gene PNN, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-202ENST00000553331 RPL3P39023 403 aaKnown RBP16.19■□□□□ 0.18
PNN-202ENST00000553331 PRIM2P49643 509 aa16.19■□□□□ 0.18
PNN-202ENST00000553331 STX3Q13277 289 aa16.19■□□□□ 0.18
PNN-202ENST00000553331 LASP1Q14847 261 aaKnown RBP16.19■□□□□ 0.18
PNN-202ENST00000553331 PDCD2Q16342 344 aaPredicted RBP16.19■□□□□ 0.18
PNN-202ENST00000553331 PPP4R4Q6NUP7 873 aa16.19■□□□□ 0.18
PNN-202ENST00000553331 ZAR1Q86SH2 424 aa16.19■□□□□ 0.18
PNN-202ENST00000553331 CNEP1R1Q8N9A8 125 aa16.19■□□□□ 0.18
PNN-202ENST00000553331 OR4C3Q8NH37 302 aa16.19■□□□□ 0.18
PNN-202ENST00000553331 FAM222BQ8WU58 562 aa16.19■□□□□ 0.18
PNN-202ENST00000553331 CDS1Q92903 461 aa16.19■□□□□ 0.18
PNN-202ENST00000553331 ZFP3Q96NJ6 502 aa16.19■□□□□ 0.18
PNN-202ENST00000553331 PIGQQ9BRB3 760 aa16.19■□□□□ 0.18
PNN-202ENST00000553331 PINK1Q9BXM7 581 aa16.19■□□□□ 0.18
PNN-202ENST00000553331 SIRT3Q9NTG7 399 aaPredicted RBP16.19■□□□□ 0.18
PNN-202ENST00000553331 FBXO34Q9NWN3 711 aa16.19■□□□□ 0.18
PNN-202ENST00000553331 NKIRAS1Q9NYS0 192 aa16.19■□□□□ 0.18
PNN-202ENST00000553331 NTMQ9P121 344 aa16.19■□□□□ 0.18
PNN-202ENST00000553331 EIF3LQ9Y262 564 aaKnown RBP16.19■□□□□ 0.18
PNN-202ENST00000553331 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.19■□□□□ 0.18
PNN-202ENST00000553331 MPDZO75970 2070 aa16.18■□□□□ 0.18
PNN-202ENST00000553331 SLC22A20A6NK97 555 aa16.18■□□□□ 0.18
PNN-202ENST00000553331 SMNDC1O75940 238 aaKnown RBP eCLIP16.18■□□□□ 0.183e-14■□□□□ 10.9
PNN-202ENST00000553331 SNUPNO95149 360 aaKnown RBP16.18■□□□□ 0.18
PNN-202ENST00000553331 OXSR1O95747 527 aaPredicted RBP16.18■□□□□ 0.18
PNN-202ENST00000553331 C6orf47O95873 294 aa16.18■□□□□ 0.18
PNN-202ENST00000553331 HMGN2P05204 90 aaKnown RBP16.18■□□□□ 0.18
PNN-202ENST00000553331 MAP3K8P41279 467 aa16.18■□□□□ 0.18
PNN-202ENST00000553331 RNF144AP50876 292 aaPredicted RBP16.18■□□□□ 0.18
PNN-202ENST00000553331 SUCLG1P53597 346 aaKnown RBP16.18■□□□□ 0.18
PNN-202ENST00000553331 TP53BP2Q13625 1128 aa16.18■□□□□ 0.18
PNN-202ENST00000553331 BCL2A1Q16548 175 aa16.18■□□□□ 0.18
PNN-202ENST00000553331 PGS1Q32NB8 556 aa16.18■□□□□ 0.18
PNN-202ENST00000553331 HOXB13Q92826 284 aaPredicted RBP16.18■□□□□ 0.18
PNN-202ENST00000553331 SH3YL1Q96HL8 342 aaPredicted RBP16.18■□□□□ 0.18
PNN-202ENST00000553331 UCN2Q96RP3 112 aa16.18■□□□□ 0.18
PNN-202ENST00000553331 PRPF18Q99633 342 aaKnown RBP16.18■□□□□ 0.18
PNN-202ENST00000553331 CLEC4MQ9H2X3 399 aaPredicted RBP16.18■□□□□ 0.18
PNN-202ENST00000553331 ACBD3Q9H3P7 528 aa16.18■□□□□ 0.18
PNN-202ENST00000553331 ATAD3AQ9NVI7 634 aa16.18■□□□□ 0.18
PNN-202ENST00000553331 GALNT8Q9NY28 637 aa16.18■□□□□ 0.18
PNN-202ENST00000553331 JKAMPQ9P055 326 aa16.18■□□□□ 0.18
PNN-202ENST00000553331 AKAP9Q99996 3911 aa16.18■□□□□ 0.18
PNN-202ENST00000553331 POLQO75417 2590 aa16.18■□□□□ 0.18
PNN-202ENST00000553331 NUP214P35658 2090 aaPredicted RBP16.17■□□□□ 0.18
PNN-202ENST00000553331 A6NNC1 897 aa16.17■□□□□ 0.18
PNN-202ENST00000553331 SNNO75324 88 aaPredicted RBP16.17■□□□□ 0.18
PNN-202ENST00000553331 G6PDP11413 515 aa16.17■□□□□ 0.18
PNN-202ENST00000553331 DNAJA1P31689 397 aaKnown RBP16.17■□□□□ 0.18
PNN-202ENST00000553331 SOAT1P35610 550 aa16.17■□□□□ 0.18
PNN-202ENST00000553331 CPOXP36551 454 aa16.17■□□□□ 0.18
PNN-202ENST00000553331 CCT3P49368 545 aaKnown RBP16.17■□□□□ 0.18
PNN-202ENST00000553331 CLDN15P56746 228 aa16.17■□□□□ 0.18
PNN-202ENST00000553331 CLDN20P56880 219 aa16.17■□□□□ 0.18
PNN-202ENST00000553331 EEFSECP57772 596 aaKnown RBP16.17■□□□□ 0.18
PNN-202ENST00000553331 POU6F2P78424 691 aaPredicted RBP16.17■□□□□ 0.18
PNN-202ENST00000553331 MLC1Q15049 377 aa16.17■□□□□ 0.18
PNN-202ENST00000553331 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.17■□□□□ 0.18
PNN-202ENST00000553331 ZCCHC12Q6PEW1 402 aa16.17■□□□□ 0.18
PNN-202ENST00000553331 GOT1L1Q8NHS2 421 aaPredicted RBP16.17■□□□□ 0.18
PNN-202ENST00000553331 RAB3IL1Q8TBN0 382 aa16.17■□□□□ 0.18
PNN-202ENST00000553331 OR5P2Q8WZ92 322 aa16.17■□□□□ 0.18
PNN-202ENST00000553331 FIG4Q92562 907 aa16.17■□□□□ 0.18
PNN-202ENST00000553331 CXorf36Q9H7Y0 433 aa16.17■□□□□ 0.18
PNN-202ENST00000553331 RASSF1Q9NS23 344 aa16.17■□□□□ 0.18
PNN-202ENST00000553331 ZNF446Q9NWS9 450 aa16.17■□□□□ 0.18
PNN-202ENST00000553331 GIN1Q9NXP7 522 aa16.17■□□□□ 0.18
PNN-202ENST00000553331 A0A1W2PNV4 684 aa16.16■□□□□ 0.18
PNN-202ENST00000553331 ALG1L2C9J202 215 aa16.16■□□□□ 0.18
PNN-202ENST00000553331 SCDO00767 359 aa16.16■□□□□ 0.18
PNN-202ENST00000553331 HCRTR2O43614 444 aa16.16■□□□□ 0.18
PNN-202ENST00000553331 OPN1LWP04000 364 aa16.16■□□□□ 0.18
PNN-202ENST00000553331 PRPS1L1P21108 318 aa16.16■□□□□ 0.18
PNN-202ENST00000553331 TBXA2RP21731 343 aa16.16■□□□□ 0.18
PNN-202ENST00000553331 RPL14P50914 215 aaKnown RBP16.16■□□□□ 0.18
PNN-202ENST00000553331 ART1P52961 327 aa16.16■□□□□ 0.18
PNN-202ENST00000553331 DIO3P55073 304 aa16.16■□□□□ 0.18
PNN-202ENST00000553331 SIRPAP78324 504 aa16.16■□□□□ 0.18
PNN-202ENST00000553331 SGCBQ16585 318 aa16.16■□□□□ 0.18
PNN-202ENST00000553331 LSM12Q3MHD2 195 aaKnown RBP16.16■□□□□ 0.18
PNN-202ENST00000553331 OR5AK3PQ8NH89 298 aa16.16■□□□□ 0.18
PNN-202ENST00000553331 FAM110BQ8TC76 370 aa16.16■□□□□ 0.18
PNN-202ENST00000553331 ZNF845Q96IR2 970 aaPredicted RBP16.16■□□□□ 0.18
PNN-202ENST00000553331 DUSP26Q9BV47 211 aa16.16■□□□□ 0.18
PNN-202ENST00000553331 BTBD2Q9BX70 525 aa16.16■□□□□ 0.18
PNN-202ENST00000553331 PIGMQ9H3S5 423 aa16.16■□□□□ 0.18
PNN-202ENST00000553331 LIME1Q9H400 295 aa16.16■□□□□ 0.18
PNN-202ENST00000553331 UBQLN4Q9NRR5 601 aa16.16■□□□□ 0.18
PNN-202ENST00000553331 PACSIN3Q9UKS6 424 aa16.16■□□□□ 0.18
PNN-202ENST00000553331 FAF1Q9UNN5 650 aaPredicted RBP16.16■□□□□ 0.18
PNN-202ENST00000553331 IGLV3-32A0A0A0MS00 114 aa16.15■□□□□ 0.18
PNN-202ENST00000553331 NPIPA5A0A0B4J1W7 369 aa16.15■□□□□ 0.18
PNN-202ENST00000553331 HMGB1P1B2RPK0 211 aaPredicted RBP16.15■□□□□ 0.18
PNN-202ENST00000553331 NPIPA7E9PJI5 369 aa16.15■□□□□ 0.18
PNN-202ENST00000553331 LINC01387J3KSC0 135 aa16.15■□□□□ 0.18
PNN-202ENST00000553331 ANKRD17O75179 2603 aaKnown RBP16.15■□□□□ 0.18
PNN-202ENST00000553331 NPIPA8P0DM63 369 aa16.15■□□□□ 0.18
PNN-202ENST00000553331 EPXP11678 715 aa16.15■□□□□ 0.18
PNN-202ENST00000553331 ATP6V1C1P21283 382 aa16.15■□□□□ 0.18
PNN-202ENST00000553331 RPS3AP61247 264 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms