RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	SLC7A13	Q8TCU3	470 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	HSPBAP1	Q96EW2	488 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	MUS81	Q96NY9	551 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	DEPDC7	Q96QD5	511 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	TAAR9	Q96RI9	348 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	GAL3ST4	Q96RP7	486 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	NIPSNAP1	Q9BPW8	284 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	DDA1	Q9BW61	102 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	GRIP2	Q9C0E4	1043 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	IRF2BPL	Q9H1B7	796 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	TOR4A	Q9NXH8	423 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	TES	Q9UGI8	421 aa	Known RBP	11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	ENOPH1	Q9UHY7	261 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	B3GALT1	Q9Y5Z6	326 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	NCOR1	O75376	2440 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	ZNF318	Q5VUA4	2279 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	CCDC187	A0A096LP49	1063 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	IGHV3-20	A0A0C4DH32	117 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	EIF4E1B	A6NMX2	242 aa	Known RBP	11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	OR10H3	O60404	316 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	CYP7B1	O75881	506 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	CD63	P08962	238 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	JMJD7	P0C870	316 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	CDK4	P11802	303 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	TGM1	P22735	817 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	NBL1	P41271	181 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	CLK3	P49761	638 aa	Known RBP	11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	UGT2B15	P54855	530 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	TPD52	P55327	224 aa	Predicted RBP	11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	HOXC5	Q00444	222 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	PLAUR	Q03405	335 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	NPRL3	Q12980	569 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	ZNF691	Q5VV52	312 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	PGBD2	Q6P3X8	592 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	FAM199X	Q6PEV8	388 aa	Predicted RBP	11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	PODNL1	Q6PEZ8	512 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	TTC33	Q6PID6	262 aa	Predicted RBP	11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	PAPD4	Q6PIY7	484 aa	Known RBP	11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	THAP5	Q7Z6K1	395 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	GLRX5	Q86SX6	157 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	SLCO6A1	Q86UG4	719 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	SLC34A3	Q8N130	599 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	PARP8	Q8N3A8	854 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	ZNF614	Q8N883	585 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	ZNF527	Q8NB42	609 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	GALNT6	Q8NCL4	622 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	TOR1AIP2	Q8NFQ8	470 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	SLC38A4	Q969I6	547 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	EFHD2	Q96C19	240 aa	Predicted RBP	11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	VMP1	Q96GC9	406 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	SLC41A3	Q96GZ6	507 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	PITX2	Q99697	317 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	WDR77	Q9BQA1	342 aa	Predicted RBP	11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	ZNF559	Q9BR84	538 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	DGCR6L	Q9BY27	220 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	BATF3	Q9NR55	127 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	CTPS2	Q9NRF8	586 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	DNAJB12	Q9NXW2	375 aa	Known RBP	11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	MYRF	Q9Y2G1	1151 aa		11.71	□□□□□ -0.53
CACNB3-223	ENST00000552480	VCAN	P13611	3396 aa		11.71	□□□□□ -0.54
CACNB3-223	ENST00000552480	TRAPPC13	A5PLN9	417 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	SERINC4	A6NH21	518 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480		H3BNH8	94 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	BCAS1	O75363	584 aa	Predicted RBP	11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	STK17B	O94768	372 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	DLGAP3	O95886	979 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	GAST	P01350	101 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	GKN3P	P0CG01	181 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	CYP4B1	P13584	511 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	PRG2	P13727	222 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	RYK	P34925	604 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	KRT20	P35900	424 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	POLR2I	P36954	125 aa	Known RBP	11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	RNF144A	P50876	292 aa	Predicted RBP	11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	NR0B1	P51843	470 aa	Known RBP	11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	CLDN6	P56747	220 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	RNF4	P78317	190 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	PLCXD2	Q0VAA5	305 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	FOXD4	Q12950	439 aa	Predicted RBP	11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	EIF3I	Q13347	325 aa	Known RBP	11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	NCF4	Q15080	339 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	TRIP6	Q15654	476 aa	Known RBP	11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	KLHL26	Q53HC5	615 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	ZNF550	Q7Z398	422 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	GDF7	Q7Z4P5	450 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	APCDD1L	Q8NCL9	501 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	SETD9	Q8NE22	299 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	OR4K5	Q8NGD3	323 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	ADAMTS16	Q8TE57	1224 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	CNOT9	Q92600	299 aa	Known RBP	11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	GTPBP3	Q969Y2	492 aa	Known RBP	11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	TP53INP1	Q96A56	240 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	LMF1	Q96S06	567 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	LPAR4	Q99677	370 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	PRR14	Q9BWN1	585 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	YTHDF1	Q9BYJ9	559 aa	Known RBP	11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	UCK2	Q9BZX2	261 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	UBQLN4	Q9NRR5	601 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	PISD	Q9UG56	409 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms