RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 NPAS1Q99742 590 aa19.02■□□□□ 0.64
SCARB1-210ENST00000545493 YIPF4Q9BSR8 244 aa19.02■□□□□ 0.64
SCARB1-210ENST00000545493 RNF122Q9H9V4 155 aa19.02■□□□□ 0.64
SCARB1-210ENST00000545493 ZCCHC3Q9NUD5 404 aaKnown RBP19.02■□□□□ 0.64
SCARB1-210ENST00000545493 MTORP42345 2549 aa19.02■□□□□ 0.63
SCARB1-210ENST00000545493 NF1P21359 2839 aa19.01■□□□□ 0.63
SCARB1-210ENST00000545493 A0A1W2PPR1 153 aa19.01■□□□□ 0.63
SCARB1-210ENST00000545493 SH3D21A4FU49 640 aa19.01■□□□□ 0.63
SCARB1-210ENST00000545493 LINC01387J3KSC0 135 aa19.01■□□□□ 0.63
SCARB1-210ENST00000545493 SLU7O95391 586 aaKnown RBP19.01■□□□□ 0.63
SCARB1-210ENST00000545493 HRGP04196 525 aa19.01■□□□□ 0.63
SCARB1-210ENST00000545493 CRHP06850 196 aa19.01■□□□□ 0.63
SCARB1-210ENST00000545493 ZNF17P17021 662 aa19.01■□□□□ 0.63
SCARB1-210ENST00000545493 TBXA2RP21731 343 aa19.01■□□□□ 0.63
SCARB1-210ENST00000545493 KIR2DL2P43627 348 aaPredicted RBP19.01■□□□□ 0.63
SCARB1-210ENST00000545493 DIO3P55073 304 aa19.01■□□□□ 0.63
SCARB1-210ENST00000545493 SIRPAP78324 504 aa19.01■□□□□ 0.63
SCARB1-210ENST00000545493 LASP1Q14847 261 aaKnown RBP19.01■□□□□ 0.63
SCARB1-210ENST00000545493 PON3Q15166 354 aa19.01■□□□□ 0.63
SCARB1-210ENST00000545493 POU4F3Q15319 338 aa19.01■□□□□ 0.63
SCARB1-210ENST00000545493 GUSBP1Q15486 140 aa19.01■□□□□ 0.63
SCARB1-210ENST00000545493 GLYR1Q49A26 553 aaPredicted RBP19.01■□□□□ 0.63
SCARB1-210ENST00000545493 ATP6AP1LQ52LC2 224 aa19.01■□□□□ 0.63
SCARB1-210ENST00000545493 C6orf136Q5SQH8 315 aa19.01■□□□□ 0.63
SCARB1-210ENST00000545493 CHMP1BQ7LBR1 199 aa19.01■□□□□ 0.63
SCARB1-210ENST00000545493 HOMEZQ8IX15 550 aa19.01■□□□□ 0.63
SCARB1-210ENST00000545493 COX18Q8N8Q8 333 aa19.01■□□□□ 0.63
SCARB1-210ENST00000545493 JADE3Q92613 823 aa19.01■□□□□ 0.63
SCARB1-210ENST00000545493 PKNOX2Q96KN3 472 aa19.01■□□□□ 0.63
SCARB1-210ENST00000545493 DACH2Q96NX9 599 aa19.01■□□□□ 0.63
SCARB1-210ENST00000545493 CXorf36Q9H7Y0 433 aa19.01■□□□□ 0.63
SCARB1-210ENST00000545493 ZNF175Q9Y473 711 aa19.01■□□□□ 0.63
SCARB1-210ENST00000545493 TESMINQ9Y4I5 508 aa19.01■□□□□ 0.63
SCARB1-210ENST00000545493 AP4B1Q9Y6B7 739 aa19.01■□□□□ 0.63
SCARB1-210ENST00000545493 MAP1AP78559 2803 aaPredicted RBP19.01■□□□□ 0.63
SCARB1-210ENST00000545493 ABCA4P78363 2273 aa19■□□□□ 0.63
SCARB1-210ENST00000545493 MSTNO14793 375 aa19■□□□□ 0.63
SCARB1-210ENST00000545493 NDUFB5O43674 189 aa19■□□□□ 0.63
SCARB1-210ENST00000545493 TNFRSF21O75509 655 aa19■□□□□ 0.63
SCARB1-210ENST00000545493 SMNDC1O75940 238 aaKnown RBP eCLIP19■□□□□ 0.63
SCARB1-210ENST00000545493 GOSR1O95249 250 aa19■□□□□ 0.63
SCARB1-210ENST00000545493 HMGN2P05204 90 aaKnown RBP19■□□□□ 0.63
SCARB1-210ENST00000545493 ALOX5P09917 674 aa19■□□□□ 0.63
SCARB1-210ENST00000545493 PRIM2P49643 509 aa19■□□□□ 0.63
SCARB1-210ENST00000545493 RIPPLY3P57055 190 aa19■□□□□ 0.63
SCARB1-210ENST00000545493 EEFSECP57772 596 aaKnown RBP19■□□□□ 0.63
SCARB1-210ENST00000545493 EEF1A1P68104 462 aaKnown RBP19■□□□□ 0.63
SCARB1-210ENST00000545493 CD226Q15762 336 aa19■□□□□ 0.63
SCARB1-210ENST00000545493 EEF1A1P5Q5VTE0 462 aa19■□□□□ 0.63
SCARB1-210ENST00000545493 ZCCHC12Q6PEW1 402 aa19■□□□□ 0.63
SCARB1-210ENST00000545493 MREGQ8N565 214 aa19■□□□□ 0.63
SCARB1-210ENST00000545493 KRTCAP2Q8N6L1 136 aa19■□□□□ 0.63
SCARB1-210ENST00000545493 FNDC5Q8NAU1 212 aa19■□□□□ 0.63
SCARB1-210ENST00000545493 PSMA8Q8TAA3 256 aa19■□□□□ 0.63
SCARB1-210ENST00000545493 CDS1Q92903 461 aa19■□□□□ 0.63
SCARB1-210ENST00000545493 TMEM109Q9BVC6 243 aa19■□□□□ 0.63
SCARB1-210ENST00000545493 OPN3Q9H1Y3 402 aaPredicted RBP19■□□□□ 0.63
SCARB1-210ENST00000545493 PLEKHF2Q9H8W4 249 aa19■□□□□ 0.63
SCARB1-210ENST00000545493 A0A1W2PRB8 838 aa18.99■□□□□ 0.63
SCARB1-210ENST00000545493 LYPLA1O75608 230 aaPredicted RBP18.99■□□□□ 0.63
SCARB1-210ENST00000545493 ATE1O95260 518 aa18.99■□□□□ 0.63
SCARB1-210ENST00000545493 DDX5P17844 614 aaKnown RBP18.99■□□□□ 0.63
SCARB1-210ENST00000545493 DNASE1P24855 282 aa18.99■□□□□ 0.63
SCARB1-210ENST00000545493 RPL3P39023 403 aaKnown RBP18.99■□□□□ 0.63
SCARB1-210ENST00000545493 PLPPR5Q32ZL2 321 aa18.99■□□□□ 0.63
SCARB1-210ENST00000545493 IL23RQ5VWK5 629 aa18.99■□□□□ 0.63
SCARB1-210ENST00000545493 FBXW10Q5XX13 1052 aa18.99■□□□□ 0.63
SCARB1-210ENST00000545493 ZNF474Q6S9Z5 364 aaPredicted RBP18.99■□□□□ 0.63
SCARB1-210ENST00000545493 BTLAQ7Z6A9 289 aa18.99■□□□□ 0.63
SCARB1-210ENST00000545493 GTPBP8Q8N3Z3 284 aaPredicted RBP18.99■□□□□ 0.63
SCARB1-210ENST00000545493 SH3YL1Q96HL8 342 aaPredicted RBP18.99■□□□□ 0.63
SCARB1-210ENST00000545493 ADGRG7Q96K78 797 aa18.99■□□□□ 0.63
SCARB1-210ENST00000545493 STACQ99469 402 aa18.99■□□□□ 0.63
SCARB1-210ENST00000545493 DUSP22Q9NRW4 184 aa18.99■□□□□ 0.63
SCARB1-210ENST00000545493 MED17Q9NVC6 651 aa18.99■□□□□ 0.63
SCARB1-210ENST00000545493 A0A087WZY1 265 aa18.98■□□□□ 0.63
SCARB1-210ENST00000545493 A0A1W2PQD3 144 aa18.98■□□□□ 0.63
SCARB1-210ENST00000545493 AQP8O94778 261 aa18.98■□□□□ 0.63
SCARB1-210ENST00000545493 C6orf47O95873 294 aa18.98■□□□□ 0.63
SCARB1-210ENST00000545493 CGAP01215 116 aa18.98■□□□□ 0.63
SCARB1-210ENST00000545493 PSMA4P25789 261 aaKnown RBP18.98■□□□□ 0.63
SCARB1-210ENST00000545493 LCN1P31025 176 aa18.98■□□□□ 0.63
SCARB1-210ENST00000545493 SERPINB4P48594 390 aa18.98■□□□□ 0.63
SCARB1-210ENST00000545493 RPS3AP61247 264 aaKnown RBP18.98■□□□□ 0.63
SCARB1-210ENST00000545493 POU6F2P78424 691 aaPredicted RBP18.98■□□□□ 0.63
SCARB1-210ENST00000545493 OCRLQ01968 901 aa18.98■□□□□ 0.63
SCARB1-210ENST00000545493 FAM27E3Q08E93 113 aa18.98■□□□□ 0.63
SCARB1-210ENST00000545493 CTU2Q2VPK5 515 aaKnown RBP18.98■□□□□ 0.63
SCARB1-210ENST00000545493 CPTPQ5TA50 214 aa18.98■□□□□ 0.63
SCARB1-210ENST00000545493 CDC73Q6P1J9 531 aa18.98■□□□□ 0.63
SCARB1-210ENST00000545493 RIMKLAQ8IXN7 391 aa18.98■□□□□ 0.63
SCARB1-210ENST00000545493 OR5P2Q8WZ92 322 aa18.98■□□□□ 0.63
SCARB1-210ENST00000545493 TMUB1Q9BVT8 246 aa18.98■□□□□ 0.63
SCARB1-210ENST00000545493 BTBD2Q9BX70 525 aa18.98■□□□□ 0.63
SCARB1-210ENST00000545493 PIGUQ9H490 435 aa18.98■□□□□ 0.63
SCARB1-210ENST00000545493 GPATCH2Q9NW75 528 aa18.98■□□□□ 0.63
SCARB1-210ENST00000545493 SNX8Q9Y5X2 465 aa18.98■□□□□ 0.63
SCARB1-210ENST00000545493 NPIPA5A0A0B4J1W7 369 aa18.97■□□□□ 0.63
SCARB1-210ENST00000545493 C7orf72A4D263 438 aa18.97■□□□□ 0.63
SCARB1-210ENST00000545493 NPIPA7E9PJI5 369 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms