RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 ZNF530Q6P9A1 599 aaPredicted RBP4.03□□□□□ -1.76
YBX3-210ENST00000540975 CENPQQ7L2Z9 268 aaPredicted RBP4.03□□□□□ -1.76
YBX3-210ENST00000540975 PPP1R42Q7Z4L9 355 aa4.03□□□□□ -1.76
YBX3-210ENST00000540975 YRDCQ86U90 279 aaKnown RBP4.03□□□□□ -1.76
YBX3-210ENST00000540975 ZNF619Q8N2I2 560 aa4.03□□□□□ -1.76
YBX3-210ENST00000540975 SLC25A38Q96DW6 304 aa4.03□□□□□ -1.76
YBX3-210ENST00000540975 ZNF560Q96MR9 790 aa4.03□□□□□ -1.76
YBX3-210ENST00000540975 CBWD1Q9BRT8 395 aa4.03□□□□□ -1.76
YBX3-210ENST00000540975 NCOR1P1Q9H4R4 102 aa4.03□□□□□ -1.76
YBX3-210ENST00000540975 DDX18Q9NVP1 670 aaKnown RBP4.03□□□□□ -1.76
YBX3-210ENST00000540975 HPCAL4Q9UM19 191 aa4.03□□□□□ -1.76
YBX3-210ENST00000540975 FGD6Q6ZV73 1430 aa4.03□□□□□ -1.76
YBX3-210ENST00000540975 MIA2Q96PC5 1412 aa4.03□□□□□ -1.76
YBX3-210ENST00000540975 CC2D2AQ9P2K1 1620 aa4.03□□□□□ -1.77
YBX3-210ENST00000540975 CHD4Q14839 1912 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 B4DXG7 233 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 AP3B1O00203 1094 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 BUB1O43683 1085 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 STK17BO94768 372 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 OLFM2O95897 454 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 ACTL6AO96019 429 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 PRB2P02812 416 aaPredicted RBP4.02□□□□□ -1.77
YBX3-210ENST00000540975 TOP1P11387 765 aaKnown RBP4.02□□□□□ -1.77
YBX3-210ENST00000540975 ATP5OP48047 213 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 ETV1P50549 477 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 EFNA3P52797 238 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 DIO3P55073 304 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 ARPC4P59998 168 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 NOP14P78316 857 aaKnown RBP4.02□□□□□ -1.77
YBX3-210ENST00000540975 IL1RL1Q01638 556 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 PUDPQ08623 228 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 PPIDQ08752 370 aaKnown RBP4.02□□□□□ -1.77
YBX3-210ENST00000540975 AP1B1Q10567 949 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 EIF4EBP2Q13542 120 aaPredicted RBP4.02□□□□□ -1.77
YBX3-210ENST00000540975 DPYSQ14117 519 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 PRR4Q16378 134 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 SBK1Q52WX2 424 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 DLEU7Q6UYE1 221 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 C9orf40Q8IXQ3 194 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 PDCL2Q8N4E4 241 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 BBOF1Q8ND07 529 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 OR6C4Q8NGE1 309 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 FBXO30Q8TB52 745 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 DTD2Q96FN9 168 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 ZNF285Q96NJ3 590 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 TM2D1Q9BX74 207 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 NSRP1Q9H0G5 558 aaKnown RBP4.02□□□□□ -1.77
YBX3-210ENST00000540975 GLT8D2Q9H1C3 349 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 MEPEQ9NQ76 525 aaPredicted RBP4.02□□□□□ -1.77
YBX3-210ENST00000540975 PDE10AQ9Y233 779 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 ARHGAP23Q9P227 1491 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 E9PCH4 1651 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 CUL7Q14999 1698 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 MTUS2Q5JR59 1369 aa4.02□□□□□ -1.77
YBX3-210ENST00000540975 CFAP43Q8NDM7 1665 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 PLEKHH2Q8IVE3 1493 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 LATO43561 262 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 ZNF189O75820 626 aaPredicted RBP4.01□□□□□ -1.77
YBX3-210ENST00000540975 CCDC166P0CW27 439 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 U2AF2P26368 475 aaKnown RBP eCLIP4.01□□□□□ -1.777e-9■□□□□ 10.4
YBX3-210ENST00000540975 CHMLP26374 656 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 NF2P35240 595 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 STK19P49842 368 aaPredicted RBP4.01□□□□□ -1.77
YBX3-210ENST00000540975 WNT4P56705 351 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 SSTP61278 116 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 CCNA1P78396 465 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 KLHL30Q0D2K2 578 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 PPP1R8Q12972 351 aaKnown RBP4.01□□□□□ -1.77
YBX3-210ENST00000540975 BTG3Q14201 252 aaPredicted RBP4.01□□□□□ -1.77
YBX3-210ENST00000540975 MAJINQ3KP22 176 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 CCDC183Q5T5S1 534 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 MEDAGQ5VYS4 303 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 OTPQ5XKR4 325 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 TPGS2Q68CL5 300 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 IGFL2Q6UWQ7 119 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 LPCAT2Q7L5N7 544 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 AMZ2Q86W34 360 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 CNTN4Q8IWV2 1026 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 MCOLN2Q8IZK6 566 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 RNF138Q8WVD3 245 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 CDKL2Q92772 493 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 CCDC51Q96ER9 411 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 TSSK1BQ9BXA7 367 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 FAM114A2Q9NRY5 505 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 ELOVL2Q9NXB9 296 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 AATFQ9NY61 560 aaKnown RBP eCLIP4.01□□□□□ -1.77
YBX3-210ENST00000540975 PTBP2Q9UKA9 531 aaKnown RBP4.01□□□□□ -1.77
YBX3-210ENST00000540975 USP6P35125 1406 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 SPATA31E1Q6ZUB1 1445 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 ROCK1Q13464 1354 aa4.01□□□□□ -1.77
YBX3-210ENST00000540975 EIF3AQ14152 1382 aaKnown RBP4.01□□□□□ -1.77
YBX3-210ENST00000540975 MEGF6O75095 1541 aa4□□□□□ -1.77
YBX3-210ENST00000540975 HECW1Q76N89 1606 aa4□□□□□ -1.77
YBX3-210ENST00000540975 A0A1B0GUL7 405 aa4□□□□□ -1.77
YBX3-210ENST00000540975 GOLGA6L19H0YKK7 550 aa4□□□□□ -1.77
YBX3-210ENST00000540975 PANO1I0J062 215 aa4□□□□□ -1.77
YBX3-210ENST00000540975 UBXN8O00124 270 aa4□□□□□ -1.77
YBX3-210ENST00000540975 CETN3O15182 167 aa4□□□□□ -1.77
YBX3-210ENST00000540975 RNF113AO15541 343 aaKnown RBP4□□□□□ -1.77
YBX3-210ENST00000540975 IGLV1-47P01700 117 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms