RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 ZCCHC12Q6PEW1 402 aa17.19■□□□□ 0.34
TNFRSF1A-212ENST00000539372 CNEP1R1Q8N9A8 125 aa17.19■□□□□ 0.34
TNFRSF1A-212ENST00000539372 GOT1L1Q8NHS2 421 aaPredicted RBP17.19■□□□□ 0.34
TNFRSF1A-212ENST00000539372 CDS1Q92903 461 aa17.19■□□□□ 0.34
TNFRSF1A-212ENST00000539372 ZNF845Q96IR2 970 aaPredicted RBP17.19■□□□□ 0.34
TNFRSF1A-212ENST00000539372 PPP1R36Q96LQ0 422 aa17.19■□□□□ 0.34
TNFRSF1A-212ENST00000539372 PIGMQ9H3S5 423 aa17.19■□□□□ 0.34
TNFRSF1A-212ENST00000539372 PACSIN3Q9UKS6 424 aa17.19■□□□□ 0.34
TNFRSF1A-212ENST00000539372 PCNX3Q9H6A9 2034 aa17.19■□□□□ 0.34
TNFRSF1A-212ENST00000539372 MED12LQ86YW9 2145 aa17.18■□□□□ 0.34
TNFRSF1A-212ENST00000539372 LINC01387J3KSC0 135 aa17.18■□□□□ 0.34
TNFRSF1A-212ENST00000539372 SMNDC1O75940 238 aaKnown RBP eCLIP17.18■□□□□ 0.34
TNFRSF1A-212ENST00000539372 TBXA2RP21731 343 aa17.18■□□□□ 0.34
TNFRSF1A-212ENST00000539372 CPOXP36551 454 aa17.18■□□□□ 0.34
TNFRSF1A-212ENST00000539372 DIO3P55073 304 aa17.18■□□□□ 0.34
TNFRSF1A-212ENST00000539372 EEFSECP57772 596 aaKnown RBP17.18■□□□□ 0.34
TNFRSF1A-212ENST00000539372 POU6F2P78424 691 aaPredicted RBP17.18■□□□□ 0.34
TNFRSF1A-212ENST00000539372 DAZAP2Q15038 168 aaPredicted RBP17.18■□□□□ 0.34
TNFRSF1A-212ENST00000539372 CHI3L2Q15782 390 aa17.18■□□□□ 0.34
TNFRSF1A-212ENST00000539372 PDCD2Q16342 344 aaPredicted RBP17.18■□□□□ 0.34
TNFRSF1A-212ENST00000539372 SPDYE7PQ495Y7 208 aa17.18■□□□□ 0.34
TNFRSF1A-212ENST00000539372 GLYR1Q49A26 553 aaPredicted RBP17.18■□□□□ 0.34
TNFRSF1A-212ENST00000539372 EXOSC6Q5RKV6 272 aaKnown RBP17.18■□□□□ 0.34
TNFRSF1A-212ENST00000539372 FBXW10Q5XX13 1052 aa17.18■□□□□ 0.34
TNFRSF1A-212ENST00000539372 SPNS3Q6ZMD2 512 aa17.18■□□□□ 0.34
TNFRSF1A-212ENST00000539372 CDC20BQ86Y33 519 aa17.18■□□□□ 0.34
TNFRSF1A-212ENST00000539372 OR5P2Q8WZ92 322 aa17.18■□□□□ 0.34
TNFRSF1A-212ENST00000539372 SH3YL1Q96HL8 342 aaPredicted RBP17.18■□□□□ 0.34
TNFRSF1A-212ENST00000539372 BTBD2Q9BX70 525 aa17.18■□□□□ 0.34
TNFRSF1A-212ENST00000539372 CENPHQ9H3R5 247 aa17.18■□□□□ 0.34
TNFRSF1A-212ENST00000539372 CXorf36Q9H7Y0 433 aa17.18■□□□□ 0.34
TNFRSF1A-212ENST00000539372 ATAD3AQ9NVI7 634 aa17.18■□□□□ 0.34
TNFRSF1A-212ENST00000539372 EIF3LQ9Y262 564 aaKnown RBP17.18■□□□□ 0.34
TNFRSF1A-212ENST00000539372 TNFRSF21O75509 655 aa17.17■□□□□ 0.34
TNFRSF1A-212ENST00000539372 NGFRP08138 427 aa17.17■□□□□ 0.34
TNFRSF1A-212ENST00000539372 G6PDP11413 515 aa17.17■□□□□ 0.34
TNFRSF1A-212ENST00000539372 HPGDP15428 266 aa17.17■□□□□ 0.34
TNFRSF1A-212ENST00000539372 CCT3P49368 545 aaKnown RBP17.17■□□□□ 0.34
TNFRSF1A-212ENST00000539372 RNF144AP50876 292 aaPredicted RBP17.17■□□□□ 0.34
TNFRSF1A-212ENST00000539372 SIRPAP78324 504 aa17.17■□□□□ 0.34
TNFRSF1A-212ENST00000539372 TP53BP2Q13625 1128 aa17.17■□□□□ 0.34
TNFRSF1A-212ENST00000539372 PON3Q15166 354 aa17.17■□□□□ 0.34
TNFRSF1A-212ENST00000539372 TMEM44Q2T9K0 475 aa17.17■□□□□ 0.34
TNFRSF1A-212ENST00000539372 OR2A2Q6IF42 318 aa17.17■□□□□ 0.34
TNFRSF1A-212ENST00000539372 VWA1Q6PCB0 445 aa17.17■□□□□ 0.34
TNFRSF1A-212ENST00000539372 ZNF781Q8N8C0 355 aa17.17■□□□□ 0.34
TNFRSF1A-212ENST00000539372 FNDC9Q8TBE3 224 aa17.17■□□□□ 0.34
TNFRSF1A-212ENST00000539372 COQ8BQ96D53 544 aa17.17■□□□□ 0.34
TNFRSF1A-212ENST00000539372 STARD4Q96DR4 205 aa17.17■□□□□ 0.34
TNFRSF1A-212ENST00000539372 NPAS1Q99742 590 aa17.17■□□□□ 0.34
TNFRSF1A-212ENST00000539372 KLHDC3Q9BQ90 382 aa17.17■□□□□ 0.34
TNFRSF1A-212ENST00000539372 UBQLN4Q9NRR5 601 aa17.17■□□□□ 0.34
TNFRSF1A-212ENST00000539372 CCM2LQ9NUG4 571 aaPredicted RBP17.17■□□□□ 0.34
TNFRSF1A-212ENST00000539372 GIN1Q9NXP7 522 aa17.17■□□□□ 0.34
TNFRSF1A-212ENST00000539372 PLEKHA6Q9Y2H5 1048 aa17.17■□□□□ 0.34
TNFRSF1A-212ENST00000539372 AP4B1Q9Y6B7 739 aa17.17■□□□□ 0.34
TNFRSF1A-212ENST00000539372 A8MXE2 369 aa17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 SCDO00767 359 aa17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 CFLARO15519 480 aa17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 ZNF500O60304 480 aaPredicted RBP17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 OPN1LWP04000 364 aa17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 SERPINE1P05121 402 aa17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 PRPS1L1P21108 318 aa17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 ABCE1P61221 599 aaKnown RBP17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 EEF1A1P68104 462 aaKnown RBP17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 CD226Q15762 336 aa17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 PGS1Q32NB8 556 aa17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 LSM12Q3MHD2 195 aaKnown RBP17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 EEF1A1P5Q5VTE0 462 aa17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 PPP4R4Q6NUP7 873 aa17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 CDC73Q6P1J9 531 aa17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 BTLAQ7Z6A9 289 aa17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 RIMKLAQ8IXN7 391 aa17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 OR56A1Q8NGH5 318 aa17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 OR5AK3PQ8NH89 298 aa17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 STACQ99469 402 aa17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 PRPF18Q99633 342 aaKnown RBP17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 ACTRT3Q9BYD9 372 aa17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 C20orf27Q9GZN8 174 aa17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 PIGUQ9H490 435 aa17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 DUSP22Q9NRW4 184 aa17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 ST6GALNAC2Q9UJ37 374 aa17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 KCNE3Q9Y6H6 103 aa17.16■□□□□ 0.34
TNFRSF1A-212ENST00000539372 HIVEP1P15822 2718 aa17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 NPIPA5A0A0B4J1W7 369 aa17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 SH3D21A4FU49 640 aa17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 NPIPA7E9PJI5 369 aa17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 EIF1AYO14602 144 aaKnown RBP17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 CRHP06850 196 aa17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 NPIPA8P0DM63 369 aa17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 CD1EP15812 388 aa17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 LCN1P31025 176 aa17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 KIR2DL2P43627 348 aaPredicted RBP17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 RPS3AP61247 264 aaKnown RBP17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 EMX2Q04743 252 aa17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 POU4F3Q15319 338 aa17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 SGCBQ16585 318 aa17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 CEP85LQ5SZL2 805 aa17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 GGNQ86UU5 652 aa17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 METTL25Q8N6Q8 603 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms