RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 AKAP10O43572 662 aa11.92□□□□□ -0.5
CLSTN3-205ENST00000535452 PLIN3O60664 434 aa11.92□□□□□ -0.5
CLSTN3-205ENST00000535452 TRIM13O60858 407 aa11.92□□□□□ -0.5
CLSTN3-205ENST00000535452 PROCP04070 461 aa11.92□□□□□ -0.5
CLSTN3-205ENST00000535452 TUBBP07437 444 aa11.92□□□□□ -0.5
CLSTN3-205ENST00000535452 KRT4P19013 534 aa11.92□□□□□ -0.5
CLSTN3-205ENST00000535452 POU6F2P78424 691 aaPredicted RBP11.92□□□□□ -0.5
CLSTN3-205ENST00000535452 LTBQ06643 244 aa11.92□□□□□ -0.5
CLSTN3-205ENST00000535452 GRAMD1BQ3KR37 738 aa11.92□□□□□ -0.5
CLSTN3-205ENST00000535452 LSM12Q3MHD2 195 aaKnown RBP11.92□□□□□ -0.5
CLSTN3-205ENST00000535452 HBMQ6B0K9 141 aa11.92□□□□□ -0.5
CLSTN3-205ENST00000535452 PLEKHM3Q6ZWE6 761 aa11.92□□□□□ -0.5
CLSTN3-205ENST00000535452 ZNF551Q7Z340 670 aaPredicted RBP11.92□□□□□ -0.5
CLSTN3-205ENST00000535452 ZNF610Q8N9Z0 462 aa11.92□□□□□ -0.5
CLSTN3-205ENST00000535452 B4GALNT2Q8NHY0 566 aa11.92□□□□□ -0.5
CLSTN3-205ENST00000535452 ACTRT2Q8TDY3 377 aa11.92□□□□□ -0.5
CLSTN3-205ENST00000535452 PIK3R3Q92569 461 aa11.92□□□□□ -0.5
CLSTN3-205ENST00000535452 ZNF764Q96H86 408 aaPredicted RBP11.92□□□□□ -0.5
CLSTN3-205ENST00000535452 PPP3R2Q96LZ3 170 aa11.92□□□□□ -0.5
CLSTN3-205ENST00000535452 TSSK3Q96PN8 268 aa11.92□□□□□ -0.5
CLSTN3-205ENST00000535452 ZCCHC3Q9NUD5 404 aaKnown RBP11.92□□□□□ -0.5
CLSTN3-205ENST00000535452 ALG1L2C9J202 215 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 G3V2L1 256 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 CFLARO15519 480 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 TMCC2O75069 709 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 OXSR1O95747 527 aaPredicted RBP11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 NGFRP08138 427 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 PRPH2P23942 346 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 GCAP28676 217 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 HOXC12P31275 282 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 KIR2DL2P43627 348 aaPredicted RBP11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 CLDN20P56880 219 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 B3GALT5-AS1P59052 145 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 RAC1P63000 192 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 RNPS1Q15287 305 aaKnown RBP11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 ATP6AP1LQ52LC2 224 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 CPTPQ5TA50 214 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 CLEC6AQ6EIG7 209 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 FIGNL1Q6PIW4 674 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 PRSS57Q6UWY2 283 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 ZNF550Q7Z398 422 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 MTERF4Q7Z6M4 381 aaKnown RBP11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 EXOC3L1Q86VI1 746 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 ZNF614Q8N883 585 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 EIF1ADQ8N9N8 165 aaKnown RBP11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 GATSQ8NAP1 163 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 OR10D3Q8NH80 312 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 PPP1R14CQ8TAE6 165 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 PHOSPHO1Q8TCT1 267 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 ADAMTS15Q8TE58 950 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 NUDT8Q8WV74 236 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 RNF138Q8WVD3 245 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 C11orf24Q96F05 449 aaPredicted RBP11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 PERPQ96FX8 193 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 SH3YL1Q96HL8 342 aaPredicted RBP11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 USB1Q9BQ65 265 aaKnown RBP11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 HDHD5Q9BXW7 423 aa11.91□□□□□ -0.5
CLSTN3-205ENST00000535452 DOCK7Q96N67 2140 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 IGLV3-32A0A0A0MS00 114 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 A0A1W2PPM1 405 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 TLDC2A0PJX2 215 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 UBFD1O14562 309 aaKnown RBP11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 LYPLA1O75608 230 aaPredicted RBP11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 NKX2-2O95096 273 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 PSMG1O95456 288 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 LINC00032P0C843 101 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 IL32P24001 234 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 SLC7A1P30825 629 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 SUCLG1P53597 346 aaKnown RBP11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 CARD18P57730 90 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 SLC18A2Q05940 514 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 ANKRD34AQ69YU3 496 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 ALKBH2Q6NS38 261 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 ANKRD26P1Q6NSI1 321 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 ZNF474Q6S9Z5 364 aaPredicted RBP11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 YTHDF3Q7Z739 585 aaKnown RBP11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 WFDC8Q8IUA0 241 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 GTPBP8Q8N3Z3 284 aaPredicted RBP11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 TMCO5AQ8N6Q1 288 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 STEAP2Q8NFT2 490 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 OR56A1Q8NGH5 318 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 OR2V1Q8NHB1 315 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 FBXO30Q8TB52 745 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 CPNE4Q96A23 557 aaPredicted RBP11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 CIDECQ96AQ7 238 aaPredicted RBP11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 MOAP1Q96BY2 351 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 STACQ99469 402 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 BTBD2Q9BX70 525 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 OR10A4Q9H209 315 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 GSX1Q9H4S2 264 aaPredicted RBP11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 PCDHGB4Q9UN71 923 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 GPR52Q9Y2T5 361 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 CELSR1Q9NYQ6 3014 aa11.9□□□□□ -0.5
CLSTN3-205ENST00000535452 A0A1W2PRB8 838 aa11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 GXYLT2A0PJZ3 443 aa11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 TNFSF11O14788 317 aa11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 TBX19O60806 448 aa11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 KCNK2O95069 426 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms