RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 LY6G6DO95868 133 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 IGSF6O95976 241 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 GSTT2P0CG29 244 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 GSTT2BP0CG30 244 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 PPIAL4GP0DN37 164 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 RPA2P15927 270 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 H2AFXP16104 143 aaPredicted RBP3.4□□□□□ -1.87
CD44-223ENST00000526553 ATP6V1C1P21283 382 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 RFC2P35250 354 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 HTR5AP47898 357 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 EMDP50402 254 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 IGLV3-21P80748 117 aaPredicted RBP3.4□□□□□ -1.87
CD44-223ENST00000526553 CHIT1Q13231 466 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 CNPY1Q3B7I2 92 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 USH1GQ495M9 461 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 CYBRD1Q53TN4 286 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 CENPPQ6IPU0 288 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 CGB2Q6NT52 195 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 GRAMD2AQ8IUY3 354 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 SHC3Q92529 594 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 LHX4Q969G2 390 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 AKR1E2Q96JD6 320 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 ELMO2Q96JJ3 720 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 C4orf36Q96KX1 117 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 TTC25Q96NG3 672 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 TESK2Q96S53 571 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 SLC30A2Q9BRI3 323 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 ZSCAN5AQ9BUG6 496 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 GSDMCQ9BYG8 508 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 IL1RL2Q9HB29 575 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 FAM114A2Q9NRY5 505 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 C1orf123Q9NWV4 160 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 DUS2Q9NX74 493 aaKnown RBP3.4□□□□□ -1.87
CD44-223ENST00000526553 GALPQ9UBC7 116 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 ZNF256Q9Y2P7 627 aaPredicted RBP3.4□□□□□ -1.87
CD44-223ENST00000526553 OR10H1Q9Y4A9 318 aa3.4□□□□□ -1.87
CD44-223ENST00000526553 HECW2Q9P2P5 1572 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 IGHV3OR16-12A0A075B7B8 117 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 LRRC30A6NM36 301 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 K7EQM0 130 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 IMPA2O14732 288 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 HAT1O14929 419 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 PDE5AO76074 875 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 UFL1O94874 794 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 ADCY5O95622 1261 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 NUDT14O95848 222 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 SNRPCP09234 159 aaKnown RBP3.39□□□□□ -1.87
CD44-223ENST00000526553 FASP25445 335 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 SAA4P35542 130 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 CYLC1P35663 651 aaPredicted RBP3.39□□□□□ -1.87
CD44-223ENST00000526553 DLSTP36957 453 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 VCPP55072 806 aaKnown RBP3.39□□□□□ -1.87
CD44-223ENST00000526553 NUCB2P80303 420 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 CSTF1Q05048 431 aaKnown RBP3.39□□□□□ -1.87
CD44-223ENST00000526553 EIF2B1Q14232 305 aaKnown RBP3.39□□□□□ -1.87
CD44-223ENST00000526553 CD226Q15762 336 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 BLOC1S2Q6QNY1 142 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 Q7L0L9 218 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 LRRC70Q7Z2Q7 622 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 TSEN54Q7Z6J9 526 aaKnown RBP3.39□□□□□ -1.87
CD44-223ENST00000526553 FAM133AQ8N9E0 248 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 RAET1EQ8TD07 263 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 SPRYD4Q8WW59 207 aaPredicted RBP3.39□□□□□ -1.87
CD44-223ENST00000526553 CASD1Q96PB1 797 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 SIGLEC12Q96PQ1 595 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 ZNF607Q96SK3 696 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 CCT7Q99832 543 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 FAM173AQ9BQD7 235 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 YTHDF1Q9BYJ9 559 aaKnown RBP3.39□□□□□ -1.87
CD44-223ENST00000526553 GORASP2Q9H8Y8 452 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 LRRC40Q9H9A6 602 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 DCAF13Q9NV06 445 aaKnown RBP3.39□□□□□ -1.87
CD44-223ENST00000526553 RRP15Q9Y3B9 282 aaKnown RBP3.39□□□□□ -1.87
CD44-223ENST00000526553 ABCA5Q8WWZ7 1642 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 ADGRL1O94910 1474 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 GRIN2AQ12879 1464 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 GRIN2DO15399 1336 aa3.39□□□□□ -1.87
CD44-223ENST00000526553 DIP2BQ9P265 1576 aa3.38□□□□□ -1.87
CD44-223ENST00000526553 PRG4Q92954 1404 aaPredicted RBP3.38□□□□□ -1.87
CD44-223ENST00000526553 SHROOM2Q13796 1616 aa3.38□□□□□ -1.87
CD44-223ENST00000526553 H3BMH7 237 aa3.38□□□□□ -1.87
CD44-223ENST00000526553 CTAGE5O15320 804 aa3.38□□□□□ -1.87
CD44-223ENST00000526553 RANBP6O60518 1105 aaKnown RBP3.38□□□□□ -1.87
CD44-223ENST00000526553 TSC22D2O75157 780 aa3.38□□□□□ -1.87
CD44-223ENST00000526553 BCAS1O75363 584 aaPredicted RBP3.38□□□□□ -1.87
CD44-223ENST00000526553 MTX2O75431 263 aa3.38□□□□□ -1.87
CD44-223ENST00000526553 OAS1P00973 400 aaKnown RBP3.38□□□□□ -1.87
CD44-223ENST00000526553 UGT2B4P06133 528 aa3.38□□□□□ -1.87
CD44-223ENST00000526553 HOXB7P09629 217 aa3.38□□□□□ -1.87
CD44-223ENST00000526553 PDHBP11177 359 aa3.38□□□□□ -1.87
CD44-223ENST00000526553 UCP1P25874 307 aa3.38□□□□□ -1.87
CD44-223ENST00000526553 PPT1P50897 306 aa3.38□□□□□ -1.87
CD44-223ENST00000526553 CBX1P83916 185 aa3.38□□□□□ -1.87
CD44-223ENST00000526553 NDPQ00604 133 aa3.38□□□□□ -1.87
CD44-223ENST00000526553 IL24Q13007 206 aa3.38□□□□□ -1.87
CD44-223ENST00000526553 RIPK1Q13546 671 aa3.38□□□□□ -1.87
CD44-223ENST00000526553 PDK3Q15120 406 aa3.38□□□□□ -1.87
CD44-223ENST00000526553 CCDC152Q4G0S7 254 aa3.38□□□□□ -1.87
CD44-223ENST00000526553 LINC01620Q4KN68 170 aa3.38□□□□□ -1.87
CD44-223ENST00000526553 Q8N7P7 452 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms