RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 FEZ2Q9UHY8 353 aaPredicted RBP5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 AAR2Q9Y312 384 aaKnown RBP5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 AP4B1Q9Y6B7 739 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 DNAH2Q9P225 4427 aa5.76□□□□□ -1.49
CTNNA1-216ENST00000519489 SH3PXD2BA1X283 911 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 SYNDIG1LA6NDD5 238 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 URADA6NGE7 173 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 SRRM5B3KS81 715 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 CD3EAPO15446 510 aaKnown RBP5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 NME6O75414 186 aaPredicted RBP5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 NCR1O76036 304 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 METTL18O95568 372 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 IGHV2-5P01817 119 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 ADRA2AP08913 450 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 SKILP12757 684 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 ZFXP17010 805 aaPredicted RBP5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 NAGAP17050 411 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 RPL4P36578 427 aaKnown RBP5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 LCN2P80188 198 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 NRN1LQ496H8 165 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 ZBTB37Q5TC79 503 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 C18orf63Q68DL7 685 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 PPP1R2P3Q6NXS1 205 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 PGBD2Q6P3X8 592 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 VHLLQ6RSH7 139 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 KLHL17Q6TDP4 642 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 C9orf139Q6ZV77 190 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 RNF144BQ7Z419 303 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 ST13P4Q8IZP2 240 aaPredicted RBP5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 SLC5A11Q8WWX8 675 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 ZNF75CPQ92670 426 aaPredicted RBP5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 RIT1Q92963 219 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 RBM18Q96H35 190 aaKnown RBP5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 F2RL3Q96RI0 385 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 NAP1L3Q99457 506 aaPredicted RBP5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 TTC1Q99614 292 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 ASCL2Q99929 193 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 TBCDQ9BTW9 1192 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 SORBS1Q9BX66 1292 aaKnown RBP5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 MAK16Q9BXY0 300 aaKnown RBP5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 ITPAQ9BY32 194 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 KRTAP4-7Q9BYR0 210 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 MMP28Q9H239 520 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 TSPY26PQ9H489 355 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 SEC61A2Q9H9S3 476 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 FKRPQ9H9S5 495 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 CXorf21Q9HAI6 301 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 CATSPERZQ9NTU4 200 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 FLRT3Q9NZU0 649 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 NTMQ9P121 344 aa5.75□□□□□ -1.49
CTNNA1-216ENST00000519489 CTAGE9A4FU28 777 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 DBX1A6NMT0 343 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 TRAPPC2LH3BP13 241 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 hCG_2039718K7EN88 272 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 PPIHO43447 177 aaKnown RBP5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 LIASO43766 372 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 ZBTB14O43829 449 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 PRAMEF4O60810 478 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 ERLIN1O75477 346 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 IGHV3-9P01782 118 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 CRYBA1P05813 215 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 CTAGE8P0CG41 777 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 SLC35E2P0CK97 266 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 MPC1LP0DKB6 136 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 TNNT1P13805 278 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 TCN1P20061 433 aaPredicted RBP5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 ATP5A1P25705 553 aaKnown RBP5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 PSMA4P25789 261 aaKnown RBP5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 NRG3P56975 720 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 PLIN5Q00G26 463 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 HGFACQ04756 655 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 HNRNPA0Q13151 305 aaKnown RBP5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 PDCD1Q15116 288 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 KRT31Q15323 416 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 GABRA6Q16445 453 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 ZNF239Q16600 458 aaKnown RBP5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 NKPD1Q17RQ9 610 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 ARMCX4Q5H9R4 360 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 TMEM201Q5SNT2 666 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 SH2D4BQ5SQS7 431 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 LGSNQ5TDP6 509 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 PRAMEF9Q5VWM5 478 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 ITPRIPL1Q6GPH6 555 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 RAD9BQ6WBX8 426 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 ZNF771Q7L3S4 317 aaPredicted RBP5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 VSIG1Q86XK7 387 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 CTAGE4Q8IX94 777 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 ACOT4Q8N9L9 421 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 OR2L5Q8NG80 312 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 OR4K17Q8NGC6 315 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 OR56A3Q8NH54 315 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 OR2V1Q8NHB1 315 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 ADAMTS15Q8TE58 950 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 DDB2Q92466 427 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 OSTF1Q92882 214 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 POP5Q969H6 163 aaKnown RBP5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 FAM118BQ9BPY3 351 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 OR10A5Q9H207 317 aa5.74□□□□□ -1.49
CTNNA1-216ENST00000519489 EHD1Q9H4M9 534 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms